Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 AL137013.1-201ENST00000432946 1228 ntBASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 MIR3180-5-201ENST00000583743 153 ntBASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 AL357033.4-201ENST00000617703 1807 ntBASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF111Q6ZNA4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 PCDHB19P-201ENST00000570871 2371 ntBASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 AC036111.1-201ENST00000533973 1582 ntBASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF111Q6ZNA4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 CR769767.2-201ENST00000622735 460 ntBASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF111Q6ZNA4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
RNF111Q6ZNA4 AL121761.2-201ENST00000598007 1648 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms