Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 AC106795.1-205ENST00000512851 1056 ntBASIC16.2■□□□□ 0.18
RTL6Q6ICC9 AF238378.1-201ENST00000526806 358 ntBASIC16.2■□□□□ 0.18
RTL6Q6ICC9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 REXO1L6P-202ENST00000619970 1078 ntBASIC16.2■□□□□ 0.18
RTL6Q6ICC9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTL6Q6ICC9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 MRPL3P1-201ENST00000400109 1033 ntBASIC16.19■□□□□ 0.18
RTL6Q6ICC9 POM121L3P-201ENST00000419331 1163 ntBASIC16.19■□□□□ 0.18
RTL6Q6ICC9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 AC008687.5-201ENST00000593746 558 ntBASIC16.19■□□□□ 0.18
RTL6Q6ICC9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.19■□□□□ 0.18
RTL6Q6ICC9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RTL6Q6ICC9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 TSPY12P-201ENST00000421279 868 ntBASIC16.18■□□□□ 0.18
RTL6Q6ICC9 SAPCD2P3-201ENST00000455031 850 ntBASIC16.18■□□□□ 0.18
RTL6Q6ICC9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 AC068472.1-201ENST00000474589 881 ntBASIC16.18■□□□□ 0.18
RTL6Q6ICC9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RTL6Q6ICC9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms