Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 TSPY12P-201ENST00000421279 868 ntBASIC18.62■□□□□ 0.57
LRRC38Q5VT99 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 HOMER2P1-201ENST00000455653 964 ntBASIC18.62■□□□□ 0.57
LRRC38Q5VT99 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 AC092597.1-201ENST00000487352 616 ntBASIC18.62■□□□□ 0.57
LRRC38Q5VT99 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.62■□□□□ 0.57
LRRC38Q5VT99 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 REXO1L11P-201ENST00000620964 1927 ntBASIC18.62■□□□□ 0.57
LRRC38Q5VT99 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC38Q5VT99 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 AC141586.5-201ENST00000624546 2050 ntBASIC18.61■□□□□ 0.57
LRRC38Q5VT99 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 RNF152P1-201ENST00000397754 604 ntBASIC18.61■□□□□ 0.57
LRRC38Q5VT99 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 TSPY5P-201ENST00000426936 936 ntBASIC18.61■□□□□ 0.57
LRRC38Q5VT99 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 LTB4R2-202ENST00000528054 3092 ntBASIC18.61■□□□□ 0.57
LRRC38Q5VT99 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRC38Q5VT99 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 AC108860.2-201ENST00000562760 2183 ntBASIC18.6■□□□□ 0.57
LRRC38Q5VT99 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 AC005521.1-201ENST00000393351 872 ntBASIC18.6■□□□□ 0.57
LRRC38Q5VT99 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 AC112698.1-201ENST00000510299 916 ntBASIC18.6■□□□□ 0.57
LRRC38Q5VT99 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 AL023806.1-201ENST00000603994 1649 ntBASIC18.6■□□□□ 0.57
LRRC38Q5VT99 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC38Q5VT99 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC38Q5VT99 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC38Q5VT99 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC38Q5VT99 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC38Q5VT99 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC38Q5VT99 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC38Q5VT99 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms