Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 AC106730.1-201ENST00000566722 1090 ntBASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 AL096828.2-201ENST00000567259 1965 ntBASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 DUTP2-201ENST00000519164 463 ntBASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 AC093503.3-201ENST00000624917 2352 ntBASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNFT1Q5M7Z0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 POLD2P1-201ENST00000511220 997 ntBASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 AC006538.3-201ENST00000612495 578 ntBASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 AL139288.1-201ENST00000623748 933 ntBASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 AC093677.2-201ENST00000600169 1863 ntBASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNFT1Q5M7Z0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.08■□□□□ 0.17
RNFT1Q5M7Z0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNFT1Q5M7Z0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
RNFT1Q5M7Z0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNFT1Q5M7Z0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNFT1Q5M7Z0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 RPS2P28-201ENST00000314255 741 ntBASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 BX005266.1-201ENST00000473402 457 ntBASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 IGHV3-22-201ENST00000520721 359 ntBASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 KRT18P58-201ENST00000527480 1120 ntBASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 OR7E14P-202ENST00000530490 1290 ntBASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 MTDHP4-201ENST00000600287 670 ntBASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 AC135776.1-201ENST00000319817 2481 ntBASIC16.08■□□□□ 0.16
RNFT1Q5M7Z0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms