Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AL354751.1-201ENST00000412768 1863 ntBASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC178Q5BJE1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 NEFHP1-201ENST00000412845 2629 ntBASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 TSPY19P-201ENST00000418461 509 ntBASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 TSPY18P-201ENST00000441642 509 ntBASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC178Q5BJE1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 SLC25A6P5-201ENST00000435663 894 ntBASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 DUSP5P1-201ENST00000441325 1139 ntBASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 FOSL1P1-201ENST00000511041 816 ntBASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 AC011467.2-201ENST00000598425 242 ntBASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 AC114341.1-201ENST00000618070 349 ntBASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 TP73-AS1-210ENST00000637775 1455 ntBASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC178Q5BJE1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 DDX43P3-201ENST00000441064 443 ntBASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 KRT126P-201ENST00000549467 1181 ntBASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 AC091304.2-201ENST00000564639 760 ntBASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 LINC01711-201ENST00000598340 967 ntBASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.93■□□□□ 0.94
CCDC178Q5BJE1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms