Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.42■□□□□ 0.86
LONRF3Q496Y0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 RASA4DP-201ENST00000460726 1199 ntBASIC20.42■□□□□ 0.86
LONRF3Q496Y0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.42■□□□□ 0.86
LONRF3Q496Y0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.42■□□□□ 0.86
LONRF3Q496Y0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LONRF3Q496Y0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 SPDYE13P-201ENST00000445314 798 ntBASIC20.41■□□□□ 0.86
LONRF3Q496Y0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.41■□□□□ 0.86
LONRF3Q496Y0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 AL136038.3-201ENST00000561909 1096 ntBASIC20.4■□□□□ 0.86
LONRF3Q496Y0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LONRF3Q496Y0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LONRF3Q496Y0 PP12613-201ENST00000424958 2230 ntBASIC20.39■□□□□ 0.86
LONRF3Q496Y0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LONRF3Q496Y0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LONRF3Q496Y0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LONRF3Q496Y0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LONRF3Q496Y0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
LONRF3Q496Y0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LONRF3Q496Y0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LONRF3Q496Y0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LONRF3Q496Y0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms