Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 AC148477.5-201ENST00000625164 1645 ntBASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM1Q2M3G4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 DUTP2-201ENST00000519164 463 ntBASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 UNC93B6-202ENST00000528242 690 ntBASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM1Q2M3G4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM1Q2M3G4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM1Q2M3G4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.83■□□□□ 0.92
SHROOM1Q2M3G4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM1Q2M3G4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
SHROOM1Q2M3G4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM1Q2M3G4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM1Q2M3G4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 RPS2P28-201ENST00000314255 741 ntBASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 AC105339.3-201ENST00000560043 636 ntBASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 Z83851.2-201ENST00000609564 659 ntBASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 AC073592.4-201ENST00000623827 446 ntBASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM1Q2M3G4 REXO1L9P-201ENST00000604264 2108 ntBASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 AC122714.2-201ENST00000502787 707 ntBASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms