Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC10.53□□□□□ -0.72
LRP1Q07954 RN7SL204P-201ENST00000582831 262 ntBASIC10.53□□□□□ -0.72
LRP1Q07954 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC10.53□□□□□ -0.72
LRP1Q07954 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LRP1Q07954 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LRP1Q07954 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LRP1Q07954 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LRP1Q07954 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC10.53□□□□□ -0.72
LRP1Q07954 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC10.53□□□□□ -0.72
LRP1Q07954 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LRP1Q07954 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.53□□□□□ -0.72
LRP1Q07954 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC10.53□□□□□ -0.72
LRP1Q07954 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.53□□□□□ -0.72
LRP1Q07954 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC10.53□□□□□ -0.72
LRP1Q07954 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC10.53□□□□□ -0.72
LRP1Q07954 AC100803.2-201ENST00000562459 1963 ntBASIC10.53□□□□□ -0.72
LRP1Q07954 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LRP1Q07954 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
LRP1Q07954 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LRP1Q07954 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC10.53□□□□□ -0.72
LRP1Q07954 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC10.53□□□□□ -0.72
LRP1Q07954 ADM-208ENST00000534464 1640 ntTSL 2 BASIC10.53□□□□□ -0.72
LRP1Q07954 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
LRP1Q07954 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.52□□□□□ -0.72
LRP1Q07954 MRPS18AP1-201ENST00000414458 589 ntBASIC10.52□□□□□ -0.72
LRP1Q07954 AP005018.1-201ENST00000525475 301 ntBASIC10.52□□□□□ -0.72
LRP1Q07954 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
LRP1Q07954 AC004877.2-201ENST00000623941 599 ntBASIC10.52□□□□□ -0.72
LRP1Q07954 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LRP1Q07954 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LRP1Q07954 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC10.52□□□□□ -0.72
LRP1Q07954 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
LRP1Q07954 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC10.52□□□□□ -0.73
LRP1Q07954 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.52□□□□□ -0.73
LRP1Q07954 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC10.52□□□□□ -0.73
LRP1Q07954 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LRP1Q07954 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.52□□□□□ -0.73
LRP1Q07954 VPS29-207ENST00000549970 818 ntTSL 3 BASIC10.52□□□□□ -0.73
LRP1Q07954 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LRP1Q07954 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LRP1Q07954 SP100-208ENST00000427101 1922 ntTSL 2 BASIC10.52□□□□□ -0.73
LRP1Q07954 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LRP1Q07954 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LRP1Q07954 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LRP1Q07954 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LRP1Q07954 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC10.52□□□□□ -0.73
LRP1Q07954 MIR4751-201ENST00000578027 74 ntBASIC10.52□□□□□ -0.73
LRP1Q07954 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LRP1Q07954 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
LRP1Q07954 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
LRP1Q07954 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
LRP1Q07954 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC10.52□□□□□ -0.73
LRP1Q07954 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LRP1Q07954 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LRP1Q07954 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LRP1Q07954 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC10.52□□□□□ -0.73
LRP1Q07954 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.52□□□□□ -0.73
LRP1Q07954 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.52□□□□□ -0.73
LRP1Q07954 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC10.52□□□□□ -0.73
LRP1Q07954 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LRP1Q07954 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 MYLKP1-201ENST00000509077 1580 ntBASIC10.51□□□□□ -0.73
LRP1Q07954 AC025580.3-201ENST00000617932 1424 ntBASIC10.51□□□□□ -0.73
LRP1Q07954 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 SRP19-202ENST00000445150 833 ntTSL 2 BASIC10.51□□□□□ -0.73
LRP1Q07954 ACTG1P14-201ENST00000446382 1122 ntBASIC10.51□□□□□ -0.73
LRP1Q07954 AP000344.2-201ENST00000512987 629 ntBASIC10.51□□□□□ -0.73
LRP1Q07954 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.51□□□□□ -0.73
LRP1Q07954 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LRP1Q07954 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC10.51□□□□□ -0.73
LRP1Q07954 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC10.51□□□□□ -0.73
LRP1Q07954 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
LRP1Q07954 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
LRP1Q07954 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.51□□□□□ -0.73
LRP1Q07954 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
LRP1Q07954 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LRP1Q07954 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC10.51□□□□□ -0.73
LRP1Q07954 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC10.51□□□□□ -0.73
LRP1Q07954 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
LRP1Q07954 AL121761.2-201ENST00000598007 1648 ntBASIC10.51□□□□□ -0.73
LRP1Q07954 AC092919.2-201ENST00000623631 1645 ntBASIC10.51□□□□□ -0.73
LRP1Q07954 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LRP1Q07954 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC10.5□□□□□ -0.73
LRP1Q07954 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LRP1Q07954 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
LRP1Q07954 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LRP1Q07954 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms