Protein–RNA interactions for Protein: Q06455

RUNX1T1, Protein CBFA2T1, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1Q06455 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 TNRC18P3-201ENST00000441896 2691 ntBASIC16.62■□□□□ 0.25
RUNX1T1Q06455 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RUNX1T1Q06455 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 CA15P1-201ENST00000481698 905 ntBASIC16.61■□□□□ 0.25
RUNX1T1Q06455 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RUNX1T1Q06455 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 MIR1238-201ENST00000408483 83 ntBASIC16.6■□□□□ 0.25
RUNX1T1Q06455 FITM1-202ENST00000559294 800 ntBASIC16.6■□□□□ 0.25
RUNX1T1Q06455 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 AL023803.3-201ENST00000615559 522 ntBASIC16.6■□□□□ 0.25
RUNX1T1Q06455 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 AC138028.4-201ENST00000564984 1845 ntBASIC16.6■□□□□ 0.25
RUNX1T1Q06455 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RUNX1T1Q06455 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RUNX1T1Q06455 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.59■□□□□ 0.25
RUNX1T1Q06455 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RUNX1T1Q06455 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms