Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
ASIC1P78348 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ASIC1P78348 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ASIC1P78348 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.04■□□□□ 0.8
ASIC1P78348 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.04■□□□□ 0.8
ASIC1P78348 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ASIC1P78348 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.04■□□□□ 0.8
ASIC1P78348 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.04■□□□□ 0.8
ASIC1P78348 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.04■□□□□ 0.8
ASIC1P78348 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 HBZP1-201ENST00000354915 429 ntBASIC20.04■□□□□ 0.8
ASIC1P78348 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.04■□□□□ 0.8
ASIC1P78348 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ASIC1P78348 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.04■□□□□ 0.8
ASIC1P78348 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
ASIC1P78348 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.04■□□□□ 0.8
ASIC1P78348 ZNF444P1-201ENST00000559497 298 ntBASIC20.04■□□□□ 0.8
ASIC1P78348 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.04■□□□□ 0.8
ASIC1P78348 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.04■□□□□ 0.8
ASIC1P78348 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.04■□□□□ 0.8
ASIC1P78348 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ASIC1P78348 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ASIC1P78348 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.04■□□□□ 0.8
ASIC1P78348 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.04■□□□□ 0.8
ASIC1P78348 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.03■□□□□ 0.8
ASIC1P78348 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ASIC1P78348 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.03■□□□□ 0.8
ASIC1P78348 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.03■□□□□ 0.8
ASIC1P78348 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 VENTXP5-201ENST00000523979 775 ntBASIC20.03■□□□□ 0.8
ASIC1P78348 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.03■□□□□ 0.8
ASIC1P78348 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.03■□□□□ 0.8
ASIC1P78348 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.03■□□□□ 0.8
ASIC1P78348 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.03■□□□□ 0.8
ASIC1P78348 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.03■□□□□ 0.8
ASIC1P78348 LINC00896-202ENST00000609602 2128 ntBASIC20.03■□□□□ 0.8
ASIC1P78348 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ASIC1P78348 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ASIC1P78348 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ASIC1P78348 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.02■□□□□ 0.8
ASIC1P78348 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.02■□□□□ 0.8
ASIC1P78348 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.02■□□□□ 0.8
ASIC1P78348 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.02■□□□□ 0.8
ASIC1P78348 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.02■□□□□ 0.8
ASIC1P78348 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.02■□□□□ 0.8
ASIC1P78348 TMPOP1-202ENST00000424642 1267 ntBASIC20.02■□□□□ 0.8
ASIC1P78348 AC063952.2-201ENST00000498792 1227 ntBASIC20.02■□□□□ 0.8
ASIC1P78348 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.02■□□□□ 0.8
ASIC1P78348 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.02■□□□□ 0.8
ASIC1P78348 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ASIC1P78348 HYMAI.1-201ENST00000620949 238 ntBASIC20.02■□□□□ 0.8
ASIC1P78348 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.02■□□□□ 0.8
ASIC1P78348 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ASIC1P78348 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ASIC1P78348 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.02■□□□□ 0.8
ASIC1P78348 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ASIC1P78348 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.02■□□□□ 0.79
ASIC1P78348 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ASIC1P78348 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.02■□□□□ 0.79
ASIC1P78348 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ASIC1P78348 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
ASIC1P78348 LINC01311-201ENST00000565162 1445 ntBASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms