Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TPM4P67936 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.12■□□□□ 0.81
TPM4P67936 C1QBPP2-201ENST00000528754 825 ntBASIC20.12■□□□□ 0.81
TPM4P67936 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.12■□□□□ 0.81
TPM4P67936 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.12■□□□□ 0.81
TPM4P67936 AC073648.6-201ENST00000641589 218 ntBASIC20.12■□□□□ 0.81
TPM4P67936 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TPM4P67936 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM4P67936 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM4P67936 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM4P67936 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM4P67936 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.12■□□□□ 0.81
TPM4P67936 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
TPM4P67936 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TPM4P67936 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TPM4P67936 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
TPM4P67936 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TPM4P67936 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM4P67936 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM4P67936 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.11■□□□□ 0.81
TPM4P67936 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM4P67936 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM4P67936 LINC01126-201ENST00000623515 1646 ntBASIC20.11■□□□□ 0.81
TPM4P67936 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
TPM4P67936 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM4P67936 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM4P67936 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM4P67936 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM4P67936 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TPM4P67936 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM4P67936 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM4P67936 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM4P67936 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM4P67936 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM4P67936 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM4P67936 AC133963.1-201ENST00000504166 1679 ntBASIC20.1■□□□□ 0.81
TPM4P67936 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.1■□□□□ 0.81
TPM4P67936 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TPM4P67936 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM4P67936 MIR935-201ENST00000401179 91 ntBASIC20.1■□□□□ 0.81
TPM4P67936 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.1■□□□□ 0.81
TPM4P67936 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM4P67936 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TPM4P67936 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.1■□□□□ 0.81
TPM4P67936 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.1■□□□□ 0.81
TPM4P67936 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.1■□□□□ 0.81
TPM4P67936 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.1■□□□□ 0.81
TPM4P67936 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.1■□□□□ 0.81
TPM4P67936 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM4P67936 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TPM4P67936 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM4P67936 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM4P67936 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
TPM4P67936 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM4P67936 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM4P67936 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.1■□□□□ 0.81
TPM4P67936 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.1■□□□□ 0.81
TPM4P67936 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TPM4P67936 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 AL121761.2-201ENST00000598007 1648 ntBASIC20.09■□□□□ 0.81
TPM4P67936 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TPM4P67936 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 LINC00602-201ENST00000629776 2065 ntBASIC20.09■□□□□ 0.81
TPM4P67936 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TPM4P67936 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM4P67936 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TPM4P67936 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.09■□□□□ 0.81
TPM4P67936 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM4P67936 MESTP1-201ENST00000404287 994 ntBASIC20.09■□□□□ 0.81
TPM4P67936 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms