Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.37■□□□□ 0.21
CXCR4P61073 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 AC006058.3-201ENST00000606217 1069 ntBASIC16.37■□□□□ 0.21
CXCR4P61073 AC130371.2-201ENST00000619443 611 ntBASIC16.37■□□□□ 0.21
CXCR4P61073 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CXCR4P61073 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CXCR4P61073 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCR4P61073 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCR4P61073 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCR4P61073 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CXCR4P61073 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CXCR4P61073 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CXCR4P61073 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CXCR4P61073 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CXCR4P61073 DOC2GP-204ENST00000639052 2548 ntBASIC16.36■□□□□ 0.21
CXCR4P61073 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CXCR4P61073 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CXCR4P61073 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CXCR4P61073 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.36■□□□□ 0.21
CXCR4P61073 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCR4P61073 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
CXCR4P61073 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCR4P61073 C1QBPP2-201ENST00000528754 825 ntBASIC16.36■□□□□ 0.21
CXCR4P61073 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.36■□□□□ 0.21
CXCR4P61073 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.36■□□□□ 0.21
CXCR4P61073 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CXCR4P61073 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.36■□□□□ 0.21
CXCR4P61073 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR4P61073 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCR4P61073 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCR4P61073 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 LINC01126-201ENST00000623515 1646 ntBASIC16.35■□□□□ 0.21
CXCR4P61073 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCR4P61073 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCR4P61073 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCR4P61073 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCR4P61073 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CXCR4P61073 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 AC011506.1-201ENST00000474329 610 ntBASIC16.35■□□□□ 0.21
CXCR4P61073 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.35■□□□□ 0.21
CXCR4P61073 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCR4P61073 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CXCR4P61073 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CXCR4P61073 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR4P61073 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCR4P61073 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CXCR4P61073 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR4P61073 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms