Protein–RNA interactions for Protein: P56817

BACE1, Beta-secretase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1P56817 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.59■□□□□ 0.89
BACE1P56817 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.59■□□□□ 0.89
BACE1P56817 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
BACE1P56817 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.59■□□□□ 0.89
BACE1P56817 AC064836.3-201ENST00000607928 673 ntBASIC20.59■□□□□ 0.89
BACE1P56817 AC004706.3-202ENST00000621574 984 ntBASIC20.59■□□□□ 0.89
BACE1P56817 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BACE1P56817 AC132938.5-201ENST00000624980 1813 ntBASIC20.59■□□□□ 0.89
BACE1P56817 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BACE1P56817 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.59■□□□□ 0.89
BACE1P56817 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BACE1P56817 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.59■□□□□ 0.89
BACE1P56817 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
BACE1P56817 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BACE1P56817 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
BACE1P56817 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.59■□□□□ 0.89
BACE1P56817 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BACE1P56817 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BACE1P56817 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
BACE1P56817 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
BACE1P56817 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.58■□□□□ 0.89
BACE1P56817 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BACE1P56817 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
BACE1P56817 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
BACE1P56817 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.58■□□□□ 0.89
BACE1P56817 AC023274.1-201ENST00000418278 595 ntBASIC20.58■□□□□ 0.89
BACE1P56817 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.58■□□□□ 0.89
BACE1P56817 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BACE1P56817 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.58■□□□□ 0.89
BACE1P56817 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.58■□□□□ 0.89
BACE1P56817 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.58■□□□□ 0.89
BACE1P56817 AP001160.2-201ENST00000596071 487 ntBASIC20.58■□□□□ 0.89
BACE1P56817 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.58■□□□□ 0.89
BACE1P56817 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
BACE1P56817 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.58■□□□□ 0.88
BACE1P56817 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BACE1P56817 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.58■□□□□ 0.88
BACE1P56817 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
BACE1P56817 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
BACE1P56817 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BACE1P56817 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BACE1P56817 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BACE1P56817 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
BACE1P56817 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
BACE1P56817 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
BACE1P56817 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.57■□□□□ 0.88
BACE1P56817 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.57■□□□□ 0.88
BACE1P56817 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BACE1P56817 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
BACE1P56817 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BACE1P56817 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.57■□□□□ 0.88
BACE1P56817 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BACE1P56817 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
BACE1P56817 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.56■□□□□ 0.88
BACE1P56817 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.56■□□□□ 0.88
BACE1P56817 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 AL096828.2-201ENST00000567259 1965 ntBASIC20.56■□□□□ 0.88
BACE1P56817 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
BACE1P56817 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.56■□□□□ 0.88
BACE1P56817 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
BACE1P56817 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.56■□□□□ 0.88
BACE1P56817 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
BACE1P56817 AC148477.5-201ENST00000625164 1645 ntBASIC20.56■□□□□ 0.88
BACE1P56817 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
BACE1P56817 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BACE1P56817 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.55■□□□□ 0.88
BACE1P56817 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BACE1P56817 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BACE1P56817 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.55■□□□□ 0.88
BACE1P56817 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BACE1P56817 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.55■□□□□ 0.88
BACE1P56817 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.55■□□□□ 0.88
BACE1P56817 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.55■□□□□ 0.88
BACE1P56817 SLC25A24-204ENST00000569674 2357 ntBASIC20.55■□□□□ 0.88
BACE1P56817 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BACE1P56817 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.55■□□□□ 0.88
BACE1P56817 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.55■□□□□ 0.88
BACE1P56817 KRT18P2-201ENST00000447938 1258 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms