Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.62■□□□□ 0.25
PER3P56645 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PER3P56645 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 AC008556.1-201ENST00000610908 2040 ntBASIC16.62■□□□□ 0.25
PER3P56645 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.62■□□□□ 0.25
PER3P56645 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PER3P56645 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.62■□□□□ 0.25
PER3P56645 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.62■□□□□ 0.25
PER3P56645 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PER3P56645 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.62■□□□□ 0.25
PER3P56645 KRT18P23-201ENST00000435622 1283 ntBASIC16.62■□□□□ 0.25
PER3P56645 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.62■□□□□ 0.25
PER3P56645 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.62■□□□□ 0.25
PER3P56645 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.62■□□□□ 0.25
PER3P56645 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
PER3P56645 AL353801.3-201ENST00000609898 542 ntBASIC16.62■□□□□ 0.25
PER3P56645 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.62■□□□□ 0.25
PER3P56645 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PER3P56645 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.62■□□□□ 0.25
PER3P56645 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.62■□□□□ 0.25
PER3P56645 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PER3P56645 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PER3P56645 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.61■□□□□ 0.25
PER3P56645 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 AL590627.1-203ENST00000421194 1026 ntBASIC16.61■□□□□ 0.25
PER3P56645 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.61■□□□□ 0.25
PER3P56645 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PER3P56645 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.61■□□□□ 0.25
PER3P56645 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.61■□□□□ 0.25
PER3P56645 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.61■□□□□ 0.25
PER3P56645 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.61■□□□□ 0.25
PER3P56645 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PER3P56645 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
PER3P56645 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PER3P56645 AL139384.1-201ENST00000612143 3047 ntBASIC16.61■□□□□ 0.25
PER3P56645 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.61■□□□□ 0.25
PER3P56645 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 KRT8P7-201ENST00000533003 1432 ntBASIC16.61■□□□□ 0.25
PER3P56645 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PER3P56645 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PER3P56645 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PER3P56645 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PER3P56645 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PER3P56645 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PER3P56645 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.6■□□□□ 0.25
PER3P56645 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.6■□□□□ 0.25
PER3P56645 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.6■□□□□ 0.25
PER3P56645 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.6■□□□□ 0.25
PER3P56645 AC099336.1-202ENST00000602961 463 ntBASIC16.6■□□□□ 0.25
PER3P56645 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.6■□□□□ 0.25
PER3P56645 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PER3P56645 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.6■□□□□ 0.25
PER3P56645 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PER3P56645 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.6■□□□□ 0.25
PER3P56645 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms