Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HADHBP55084 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.77■□□□□ 0.6
HADHBP55084 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
HADHBP55084 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HADHBP55084 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HADHBP55084 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
HADHBP55084 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
HADHBP55084 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HADHBP55084 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HADHBP55084 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HADHBP55084 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.76■□□□□ 0.59
HADHBP55084 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.76■□□□□ 0.59
HADHBP55084 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.76■□□□□ 0.59
HADHBP55084 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.76■□□□□ 0.59
HADHBP55084 AL031432.5-201ENST00000641059 760 ntBASIC18.76■□□□□ 0.59
HADHBP55084 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.76■□□□□ 0.59
HADHBP55084 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HADHBP55084 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.76■□□□□ 0.59
HADHBP55084 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HADHBP55084 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
HADHBP55084 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HADHBP55084 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
HADHBP55084 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.75■□□□□ 0.59
HADHBP55084 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HADHBP55084 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.75■□□□□ 0.59
HADHBP55084 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.75■□□□□ 0.59
HADHBP55084 SLC25A3P1-201ENST00000443844 931 ntBASIC18.75■□□□□ 0.59
HADHBP55084 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.75■□□□□ 0.59
HADHBP55084 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 AC004263.2-201ENST00000617183 678 ntBASIC18.75■□□□□ 0.59
HADHBP55084 AL023973.1-201ENST00000624619 620 ntBASIC18.75■□□□□ 0.59
HADHBP55084 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HADHBP55084 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.75■□□□□ 0.59
HADHBP55084 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HADHBP55084 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
HADHBP55084 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.75■□□□□ 0.59
HADHBP55084 PCDHA12-202ENST00000613593 2588 ntBASIC18.75■□□□□ 0.59
HADHBP55084 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HADHBP55084 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HADHBP55084 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.74■□□□□ 0.59
HADHBP55084 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
HADHBP55084 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 AD000864.1-201ENST00000624076 2295 ntBASIC18.74■□□□□ 0.59
HADHBP55084 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.74■□□□□ 0.59
HADHBP55084 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.74■□□□□ 0.59
HADHBP55084 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.74■□□□□ 0.59
HADHBP55084 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.74■□□□□ 0.59
HADHBP55084 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 AC112698.1-201ENST00000510299 916 ntBASIC18.74■□□□□ 0.59
HADHBP55084 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.74■□□□□ 0.59
HADHBP55084 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.74■□□□□ 0.59
HADHBP55084 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
HADHBP55084 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.74■□□□□ 0.59
HADHBP55084 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HADHBP55084 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HADHBP55084 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HADHBP55084 BX276092.7-203ENST00000637198 1536 ntBASIC18.74■□□□□ 0.59
HADHBP55084 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.74■□□□□ 0.59
HADHBP55084 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
HADHBP55084 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HADHBP55084 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HADHBP55084 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.73■□□□□ 0.59
HADHBP55084 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms