Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.18■□□□□ 0.66
RAD23BP54727 AL121672.3-201ENST00000608644 468 ntBASIC19.18■□□□□ 0.66
RAD23BP54727 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAD23BP54727 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD23BP54727 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.18■□□□□ 0.66
RAD23BP54727 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD23BP54727 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD23BP54727 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.18■□□□□ 0.66
RAD23BP54727 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.18■□□□□ 0.66
RAD23BP54727 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAD23BP54727 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAD23BP54727 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.17■□□□□ 0.66
RAD23BP54727 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.17■□□□□ 0.66
RAD23BP54727 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.17■□□□□ 0.66
RAD23BP54727 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAD23BP54727 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.17■□□□□ 0.66
RAD23BP54727 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RAD23BP54727 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RAD23BP54727 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.16■□□□□ 0.66
RAD23BP54727 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.16■□□□□ 0.66
RAD23BP54727 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAD23BP54727 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
RAD23BP54727 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.16■□□□□ 0.66
RAD23BP54727 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
RAD23BP54727 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.16■□□□□ 0.66
RAD23BP54727 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAD23BP54727 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAD23BP54727 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RAD23BP54727 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RAD23BP54727 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAD23BP54727 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
RAD23BP54727 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RAD23BP54727 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAD23BP54727 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 CHCHD2P8-201ENST00000429873 447 ntBASIC19.15■□□□□ 0.66
RAD23BP54727 TSSC2-201ENST00000450217 709 ntBASIC19.15■□□□□ 0.66
RAD23BP54727 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.15■□□□□ 0.66
RAD23BP54727 AC090616.6-201ENST00000582640 721 ntBASIC19.15■□□□□ 0.66
RAD23BP54727 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 AL592071.1-201ENST00000611956 408 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms