Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 PRSS29P-201ENST00000440800 595 ntBASIC19.68■□□□□ 0.74
ACLYP53396 IGHV3-65-201ENST00000523210 341 ntBASIC19.68■□□□□ 0.74
ACLYP53396 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ACLYP53396 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.68■□□□□ 0.74
ACLYP53396 AC008667.4-201ENST00000607370 168 ntBASIC19.68■□□□□ 0.74
ACLYP53396 AL078644.1-201ENST00000609881 752 ntBASIC19.68■□□□□ 0.74
ACLYP53396 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.68■□□□□ 0.74
ACLYP53396 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ACLYP53396 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ACLYP53396 AC132938.5-201ENST00000624980 1813 ntBASIC19.67■□□□□ 0.74
ACLYP53396 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ACLYP53396 AC148477.5-201ENST00000625164 1645 ntBASIC19.67■□□□□ 0.74
ACLYP53396 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.67■□□□□ 0.74
ACLYP53396 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.67■□□□□ 0.74
ACLYP53396 AL645939.2-201ENST00000427340 991 ntBASIC19.67■□□□□ 0.74
ACLYP53396 RPS15P9-201ENST00000494093 319 ntBASIC19.67■□□□□ 0.74
ACLYP53396 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.67■□□□□ 0.74
ACLYP53396 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.67■□□□□ 0.74
ACLYP53396 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.67■□□□□ 0.74
ACLYP53396 AC004790.2-201ENST00000623588 572 ntBASIC19.67■□□□□ 0.74
ACLYP53396 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.67■□□□□ 0.74
ACLYP53396 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ACLYP53396 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 NCF1C-201ENST00000438382 1427 ntBASIC19.67■□□□□ 0.74
ACLYP53396 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACLYP53396 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ACLYP53396 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.66■□□□□ 0.74
ACLYP53396 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.66■□□□□ 0.74
ACLYP53396 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.66■□□□□ 0.74
ACLYP53396 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ACLYP53396 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.66■□□□□ 0.74
ACLYP53396 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.66■□□□□ 0.74
ACLYP53396 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
ACLYP53396 AP002472.1-201ENST00000577490 586 ntBASIC19.66■□□□□ 0.74
ACLYP53396 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 ELL2P1-201ENST00000413990 1906 ntBASIC19.66■□□□□ 0.74
ACLYP53396 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.66■□□□□ 0.74
ACLYP53396 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 GPR89P-201ENST00000407924 1495 ntBASIC19.66■□□□□ 0.74
ACLYP53396 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ACLYP53396 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.65■□□□□ 0.74
ACLYP53396 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.65■□□□□ 0.74
ACLYP53396 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.65■□□□□ 0.74
ACLYP53396 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.65■□□□□ 0.74
ACLYP53396 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ACLYP53396 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ACLYP53396 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.65■□□□□ 0.74
ACLYP53396 CEND1P1-201ENST00000451006 455 ntBASIC19.65■□□□□ 0.74
ACLYP53396 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.65■□□□□ 0.74
ACLYP53396 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.65■□□□□ 0.74
ACLYP53396 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.65■□□□□ 0.74
ACLYP53396 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ACLYP53396 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.65■□□□□ 0.74
ACLYP53396 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.65■□□□□ 0.74
ACLYP53396 AL049757.1-201ENST00000616842 1596 ntBASIC19.65■□□□□ 0.74
ACLYP53396 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACLYP53396 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ACLYP53396 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.64■□□□□ 0.74
ACLYP53396 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.64■□□□□ 0.73
ACLYP53396 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.64■□□□□ 0.73
ACLYP53396 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACLYP53396 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms