Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2A1P52655 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2A1P52655 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.63■□□□□ 0.41
GTF2A1P52655 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2A1P52655 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2A1P52655 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
GTF2A1P52655 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
GTF2A1P52655 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2A1P52655 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2A1P52655 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 AC006449.5-201ENST00000610658 2098 ntBASIC17.62■□□□□ 0.41
GTF2A1P52655 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.62■□□□□ 0.41
GTF2A1P52655 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.62■□□□□ 0.41
GTF2A1P52655 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GTF2A1P52655 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2A1P52655 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2A1P52655 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.62■□□□□ 0.41
GTF2A1P52655 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GTF2A1P52655 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.62■□□□□ 0.41
GTF2A1P52655 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2A1P52655 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GTF2A1P52655 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
GTF2A1P52655 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2A1P52655 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
GTF2A1P52655 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GTF2A1P52655 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2A1P52655 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2A1P52655 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
GTF2A1P52655 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
GTF2A1P52655 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2A1P52655 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
GTF2A1P52655 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2A1P52655 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2A1P52655 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2A1P52655 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2A1P52655 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.61■□□□□ 0.41
GTF2A1P52655 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2A1P52655 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GTF2A1P52655 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.61■□□□□ 0.41
GTF2A1P52655 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2A1P52655 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2A1P52655 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.61■□□□□ 0.41
GTF2A1P52655 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.61■□□□□ 0.41
GTF2A1P52655 KRT18P20-201ENST00000548986 1279 ntBASIC17.61■□□□□ 0.41
GTF2A1P52655 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.61■□□□□ 0.41
GTF2A1P52655 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2A1P52655 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.61■□□□□ 0.41
GTF2A1P52655 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GTF2A1P52655 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2A1P52655 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GTF2A1P52655 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2A1P52655 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2A1P52655 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2A1P52655 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.61■□□□□ 0.41
GTF2A1P52655 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
GTF2A1P52655 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2A1P52655 AL122018.1-201ENST00000446607 2310 ntBASIC17.6■□□□□ 0.41
GTF2A1P52655 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
GTF2A1P52655 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GTF2A1P52655 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.6■□□□□ 0.41
GTF2A1P52655 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2A1P52655 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.6■□□□□ 0.41
GTF2A1P52655 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2A1P52655 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.6■□□□□ 0.41
GTF2A1P52655 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.6■□□□□ 0.41
GTF2A1P52655 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2A1P52655 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.6■□□□□ 0.41
GTF2A1P52655 AP001271.2-201ENST00000624018 1556 ntBASIC17.6■□□□□ 0.41
GTF2A1P52655 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.6■□□□□ 0.41
GTF2A1P52655 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2A1P52655 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2A1P52655 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms