Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.81■□□□□ 0.6
CLCN4P51793 AD001527.2-201ENST00000622994 785 ntBASIC18.81■□□□□ 0.6
CLCN4P51793 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN4P51793 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN4P51793 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLCN4P51793 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN4P51793 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN4P51793 AC010460.3-201ENST00000511359 1579 ntBASIC18.81■□□□□ 0.6
CLCN4P51793 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN4P51793 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN4P51793 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.8■□□□□ 0.6
CLCN4P51793 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CLCN4P51793 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN4P51793 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CLCN4P51793 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CLCN4P51793 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN4P51793 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 KRT18P27-201ENST00000427733 1299 ntBASIC18.8■□□□□ 0.6
CLCN4P51793 AC007967.2-201ENST00000432613 625 ntBASIC18.8■□□□□ 0.6
CLCN4P51793 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCN4P51793 AC112482.1-201ENST00000492080 688 ntBASIC18.8■□□□□ 0.6
CLCN4P51793 AC122714.2-201ENST00000502787 707 ntBASIC18.8■□□□□ 0.6
CLCN4P51793 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN4P51793 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN4P51793 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCN4P51793 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCN4P51793 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN4P51793 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN4P51793 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN4P51793 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN4P51793 ESPNP-201ENST00000270691 2015 ntBASIC18.79■□□□□ 0.6
CLCN4P51793 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN4P51793 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLCN4P51793 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CLCN4P51793 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCN4P51793 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN4P51793 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.79■□□□□ 0.6
CLCN4P51793 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN4P51793 DNAJB3-201ENST00000446806 729 ntBASIC18.79■□□□□ 0.6
CLCN4P51793 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.79■□□□□ 0.6
CLCN4P51793 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN4P51793 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCN4P51793 MIR3687-2-201ENST00000577708 61 ntBASIC18.79■□□□□ 0.6
CLCN4P51793 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN4P51793 MIR3687-1-201ENST00000614492 61 ntBASIC18.79■□□□□ 0.6
CLCN4P51793 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN4P51793 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN4P51793 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLCN4P51793 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CLCN4P51793 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLCN4P51793 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLCN4P51793 AL138781.2-201ENST00000617896 1843 ntBASIC18.79■□□□□ 0.6
CLCN4P51793 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN4P51793 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLCN4P51793 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCN4P51793 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCN4P51793 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN4P51793 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN4P51793 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN4P51793 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCN4P51793 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN4P51793 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN4P51793 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLCN4P51793 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN4P51793 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN4P51793 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN4P51793 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN4P51793 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CLCN4P51793 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN4P51793 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCN4P51793 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CLCN4P51793 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCN4P51793 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN4P51793 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN4P51793 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN4P51793 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN4P51793 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCN4P51793 AL031598.1-201ENST00000561511 1773 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms