Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.78■□□□□ 0.76
GPC3P51654 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.78■□□□□ 0.76
GPC3P51654 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.78■□□□□ 0.76
GPC3P51654 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 AC132008.2-207ENST00000454517 770 ntBASIC19.78■□□□□ 0.76
GPC3P51654 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.78■□□□□ 0.76
GPC3P51654 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
GPC3P51654 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.78■□□□□ 0.76
GPC3P51654 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.78■□□□□ 0.76
GPC3P51654 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GPC3P51654 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GPC3P51654 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GPC3P51654 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GPC3P51654 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
GPC3P51654 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC3P51654 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
GPC3P51654 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC3P51654 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.77■□□□□ 0.76
GPC3P51654 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC3P51654 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GPC3P51654 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GPC3P51654 INTS4P1-201ENST00000438455 1935 ntBASIC19.77■□□□□ 0.76
GPC3P51654 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC3P51654 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
GPC3P51654 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
GPC3P51654 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GPC3P51654 MRPL3P1-201ENST00000400109 1033 ntBASIC19.77■□□□□ 0.76
GPC3P51654 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.77■□□□□ 0.76
GPC3P51654 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC3P51654 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.77■□□□□ 0.76
GPC3P51654 AC011467.2-201ENST00000598425 242 ntBASIC19.77■□□□□ 0.76
GPC3P51654 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC3P51654 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.77■□□□□ 0.76
GPC3P51654 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GPC3P51654 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.77■□□□□ 0.76
GPC3P51654 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GPC3P51654 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC3P51654 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GPC3P51654 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.77■□□□□ 0.76
GPC3P51654 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GPC3P51654 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GPC3P51654 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GPC3P51654 AC020763.4-201ENST00000623414 4170 ntBASIC19.76■□□□□ 0.75
GPC3P51654 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
GPC3P51654 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 AC093010.1-201ENST00000473625 1624 ntBASIC19.76■□□□□ 0.75
GPC3P51654 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.76■□□□□ 0.75
GPC3P51654 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
GPC3P51654 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.76■□□□□ 0.75
GPC3P51654 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.76■□□□□ 0.75
GPC3P51654 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
GPC3P51654 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GPC3P51654 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
GPC3P51654 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.76■□□□□ 0.75
GPC3P51654 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.76■□□□□ 0.75
GPC3P51654 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 TP73-AS1-207ENST00000624167 988 ntBASIC19.76■□□□□ 0.75
GPC3P51654 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
GPC3P51654 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
GPC3P51654 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GPC3P51654 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.76■□□□□ 0.75
GPC3P51654 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.76■□□□□ 0.75
GPC3P51654 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC3P51654 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.76■□□□□ 0.75
GPC3P51654 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC3P51654 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.75■□□□□ 0.75
GPC3P51654 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC3P51654 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC3P51654 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms