Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB5CP51148 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB5CP51148 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB5CP51148 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB5CP51148 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB5CP51148 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5CP51148 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5CP51148 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5CP51148 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.46□□□□□ -0.1
RAB5CP51148 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5CP51148 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
RAB5CP51148 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5CP51148 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB5CP51148 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5CP51148 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
RAB5CP51148 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5CP51148 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5CP51148 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5CP51148 AC008741.2-201ENST00000612792 3115 ntBASIC14.45□□□□□ -0.1
RAB5CP51148 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RAB5CP51148 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB5CP51148 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
RAB5CP51148 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5CP51148 KRT18P14-201ENST00000534205 1250 ntBASIC14.45□□□□□ -0.1
RAB5CP51148 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 AC007326.2-201ENST00000624224 7579 ntBASIC14.45□□□□□ -0.1
RAB5CP51148 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5CP51148 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5CP51148 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5CP51148 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5CP51148 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5CP51148 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RAB5CP51148 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5CP51148 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5CP51148 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5CP51148 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5CP51148 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB5CP51148 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5CP51148 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5CP51148 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB5CP51148 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.44□□□□□ -0.1
RAB5CP51148 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5CP51148 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5CP51148 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5CP51148 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5CP51148 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5CP51148 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB5CP51148 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAB5CP51148 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5CP51148 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5CP51148 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
RAB5CP51148 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RAB5CP51148 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5CP51148 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB5CP51148 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5CP51148 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
RAB5CP51148 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5CP51148 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5CP51148 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5CP51148 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB5CP51148 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5CP51148 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
RAB5CP51148 AC010980.2-201ENST00000587099 1412 ntBASIC14.43□□□□□ -0.1
RAB5CP51148 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5CP51148 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB5CP51148 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5CP51148 KRT17P1-201ENST00000399211 1546 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms