Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF9P41273 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF9P41273 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFSF9P41273 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF9P41273 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF9P41273 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF9P41273 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TNFSF9P41273 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TNFSF9P41273 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.39■□□□□ 0.69
TNFSF9P41273 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.39■□□□□ 0.69
TNFSF9P41273 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.39■□□□□ 0.69
TNFSF9P41273 AL121894.2-201ENST00000602977 491 ntBASIC19.39■□□□□ 0.69
TNFSF9P41273 IFNL4P1-201ENST00000607083 540 ntBASIC19.39■□□□□ 0.69
TNFSF9P41273 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFSF9P41273 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TNFSF9P41273 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFSF9P41273 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFSF9P41273 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
TNFSF9P41273 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
TNFSF9P41273 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFSF9P41273 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF9P41273 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TNFSF9P41273 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TNFSF9P41273 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFSF9P41273 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFSF9P41273 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFSF9P41273 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TNFSF9P41273 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
TNFSF9P41273 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.38■□□□□ 0.69
TNFSF9P41273 AC091304.2-201ENST00000564639 760 ntBASIC19.38■□□□□ 0.69
TNFSF9P41273 AL121772.3-201ENST00000610840 674 ntBASIC19.38■□□□□ 0.69
TNFSF9P41273 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.38■□□□□ 0.69
TNFSF9P41273 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFSF9P41273 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFSF9P41273 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
TNFSF9P41273 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF9P41273 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 AC009949.1-201ENST00000623048 1830 ntBASIC19.37■□□□□ 0.69
TNFSF9P41273 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF9P41273 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.37■□□□□ 0.69
TNFSF9P41273 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF9P41273 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF9P41273 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TNFSF9P41273 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF9P41273 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
TNFSF9P41273 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 AC007967.3-201ENST00000434308 558 ntBASIC19.37■□□□□ 0.69
TNFSF9P41273 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
TNFSF9P41273 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.37■□□□□ 0.69
TNFSF9P41273 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF9P41273 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.37■□□□□ 0.69
TNFSF9P41273 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 AC114341.1-201ENST00000618070 349 ntBASIC19.37■□□□□ 0.69
TNFSF9P41273 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF9P41273 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF9P41273 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TNFSF9P41273 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms