Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.64■□□□□ 0.57
SCNN1AP37088 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCNN1AP37088 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCNN1AP37088 COX5BP2-201ENST00000392354 334 ntBASIC18.64■□□□□ 0.57
SCNN1AP37088 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SCNN1AP37088 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.64■□□□□ 0.57
SCNN1AP37088 AC005104.2-201ENST00000427818 678 ntBASIC18.64■□□□□ 0.57
SCNN1AP37088 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCNN1AP37088 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.64■□□□□ 0.57
SCNN1AP37088 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SCNN1AP37088 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SCNN1AP37088 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.64■□□□□ 0.57
SCNN1AP37088 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCNN1AP37088 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.64■□□□□ 0.57
SCNN1AP37088 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCNN1AP37088 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.64■□□□□ 0.57
SCNN1AP37088 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SCNN1AP37088 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.63■□□□□ 0.57
SCNN1AP37088 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SCNN1AP37088 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
SCNN1AP37088 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.63■□□□□ 0.57
SCNN1AP37088 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SCNN1AP37088 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.63■□□□□ 0.57
SCNN1AP37088 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.63■□□□□ 0.57
SCNN1AP37088 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.63■□□□□ 0.57
SCNN1AP37088 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.63■□□□□ 0.57
SCNN1AP37088 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.63■□□□□ 0.57
SCNN1AP37088 Z69720.1-201ENST00000601483 472 ntBASIC18.63■□□□□ 0.57
SCNN1AP37088 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SCNN1AP37088 AC012317.2-201ENST00000623305 2251 ntBASIC18.63■□□□□ 0.57
SCNN1AP37088 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.63■□□□□ 0.57
SCNN1AP37088 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.63■□□□□ 0.57
SCNN1AP37088 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SCNN1AP37088 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.63■□□□□ 0.57
SCNN1AP37088 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCNN1AP37088 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCNN1AP37088 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.62■□□□□ 0.57
SCNN1AP37088 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCNN1AP37088 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCNN1AP37088 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCNN1AP37088 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCNN1AP37088 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.62■□□□□ 0.57
SCNN1AP37088 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.62■□□□□ 0.57
SCNN1AP37088 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCNN1AP37088 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.62■□□□□ 0.57
SCNN1AP37088 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.62■□□□□ 0.57
SCNN1AP37088 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.62■□□□□ 0.57
SCNN1AP37088 AP005901.3-202ENST00000581653 237 ntBASIC18.62■□□□□ 0.57
SCNN1AP37088 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SCNN1AP37088 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.62■□□□□ 0.57
SCNN1AP37088 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SCNN1AP37088 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCNN1AP37088 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCNN1AP37088 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCNN1AP37088 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SCNN1AP37088 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SCNN1AP37088 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 LINC00304-203ENST00000565008 1864 ntBASIC18.61■□□□□ 0.57
SCNN1AP37088 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SCNN1AP37088 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 TOB2P1-201ENST00000469761 992 ntBASIC18.61■□□□□ 0.57
SCNN1AP37088 AC122714.2-201ENST00000502787 707 ntBASIC18.61■□□□□ 0.57
SCNN1AP37088 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.61■□□□□ 0.57
SCNN1AP37088 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 AC009533.2-201ENST00000543664 586 ntBASIC18.61■□□□□ 0.57
SCNN1AP37088 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.61■□□□□ 0.57
SCNN1AP37088 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.61■□□□□ 0.57
SCNN1AP37088 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCNN1AP37088 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SCNN1AP37088 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SCNN1AP37088 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms