Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.93■■□□□ 1.1
CHRNA5P30532 AC004835.2-201ENST00000603762 682 ntBASIC21.93■■□□□ 1.1
CHRNA5P30532 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CHRNA5P30532 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CHRNA5P30532 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHRNA5P30532 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CHRNA5P30532 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 AL353593.2-201ENST00000602529 1483 ntBASIC21.92■■□□□ 1.1
CHRNA5P30532 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 MRPL20P1-201ENST00000400819 433 ntBASIC21.92■■□□□ 1.1
CHRNA5P30532 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 AC074386.1-202ENST00000463561 864 ntBASIC21.92■■□□□ 1.1
CHRNA5P30532 MIR4745-201ENST00000577608 62 ntBASIC21.92■■□□□ 1.1
CHRNA5P30532 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CHRNA5P30532 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.92■■□□□ 1.1
CHRNA5P30532 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHRNA5P30532 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA5P30532 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA5P30532 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA5P30532 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA5P30532 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CHRNA5P30532 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA5P30532 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA5P30532 COX5BP2-201ENST00000392354 334 ntBASIC21.91■■□□□ 1.1
CHRNA5P30532 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.91■■□□□ 1.1
CHRNA5P30532 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.91■■□□□ 1.1
CHRNA5P30532 RHOQP3-201ENST00000437982 621 ntBASIC21.91■■□□□ 1.1
CHRNA5P30532 ACTG1P14-201ENST00000446382 1122 ntBASIC21.91■■□□□ 1.1
CHRNA5P30532 HLA-J-202ENST00000469281 1241 ntBASIC21.91■■□□□ 1.1
CHRNA5P30532 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.91■■□□□ 1.1
CHRNA5P30532 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.91■■□□□ 1.1
CHRNA5P30532 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.91■■□□□ 1.1
CHRNA5P30532 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.91■■□□□ 1.1
CHRNA5P30532 AC092902.6-201ENST00000641783 218 ntBASIC21.91■■□□□ 1.1
CHRNA5P30532 AFG3L1P-217ENST00000557444 2447 ntBASIC21.91■■□□□ 1.1
CHRNA5P30532 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA5P30532 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA5P30532 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHRNA5P30532 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.91■■□□□ 1.1
CHRNA5P30532 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.91■■□□□ 1.1
CHRNA5P30532 AL049757.1-201ENST00000616842 1596 ntBASIC21.91■■□□□ 1.1
CHRNA5P30532 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA5P30532 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CHRNA5P30532 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA5P30532 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA5P30532 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.9■■□□□ 1.1
CHRNA5P30532 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.9■■□□□ 1.1
CHRNA5P30532 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.9■■□□□ 1.1
CHRNA5P30532 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.9■■□□□ 1.1
CHRNA5P30532 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.9■■□□□ 1.1
CHRNA5P30532 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.9■■□□□ 1.1
CHRNA5P30532 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.9■■□□□ 1.1
CHRNA5P30532 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.9■■□□□ 1.1
CHRNA5P30532 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.9■■□□□ 1.1
CHRNA5P30532 AC105339.1-204ENST00000636249 355 ntBASIC21.9■■□□□ 1.1
CHRNA5P30532 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHRNA5P30532 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.9■■□□□ 1.1
CHRNA5P30532 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CHRNA5P30532 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHRNA5P30532 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CHRNA5P30532 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CHRNA5P30532 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHRNA5P30532 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHRNA5P30532 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHRNA5P30532 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA5P30532 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CHRNA5P30532 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CHRNA5P30532 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.89■■□□□ 1.09
CHRNA5P30532 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.89■■□□□ 1.09
CHRNA5P30532 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA5P30532 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.89■■□□□ 1.09
CHRNA5P30532 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CHRNA5P30532 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.89■■□□□ 1.09
CHRNA5P30532 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA5P30532 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.89■■□□□ 1.09
CHRNA5P30532 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.89■■□□□ 1.09
CHRNA5P30532 AL805961.1-202ENST00000641562 540 ntBASIC21.89■■□□□ 1.09
CHRNA5P30532 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA5P30532 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CHRNA5P30532 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA5P30532 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CHRNA5P30532 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.89■■□□□ 1.09
CHRNA5P30532 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHRNA5P30532 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA5P30532 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CHRNA5P30532 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA5P30532 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA5P30532 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA5P30532 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHRNA5P30532 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms