Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN3P20807 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN3P20807 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN3P20807 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPN3P20807 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN3P20807 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CAPN3P20807 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CAPN3P20807 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN3P20807 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN3P20807 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN3P20807 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN3P20807 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPN3P20807 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN3P20807 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN3P20807 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN3P20807 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN3P20807 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN3P20807 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN3P20807 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPN3P20807 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CAPN3P20807 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
CAPN3P20807 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN3P20807 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CAPN3P20807 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.28■□□□□ 0.36
CAPN3P20807 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPN3P20807 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CAPN3P20807 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CAPN3P20807 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPN3P20807 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CAPN3P20807 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CAPN3P20807 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN3P20807 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPN3P20807 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPN3P20807 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CAPN3P20807 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN3P20807 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPN3P20807 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CAPN3P20807 CYP2D8P-201ENST00000433633 1490 ntBASIC17.27■□□□□ 0.36
CAPN3P20807 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN3P20807 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN3P20807 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPN3P20807 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN3P20807 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN3P20807 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN3P20807 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.27■□□□□ 0.36
CAPN3P20807 KRT126P-201ENST00000549467 1181 ntBASIC17.27■□□□□ 0.36
CAPN3P20807 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.27■□□□□ 0.36
CAPN3P20807 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPN3P20807 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN3P20807 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CAPN3P20807 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPN3P20807 KRT8P7-201ENST00000533003 1432 ntBASIC17.27■□□□□ 0.35
CAPN3P20807 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.27■□□□□ 0.35
CAPN3P20807 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPN3P20807 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CAPN3P20807 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPN3P20807 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
CAPN3P20807 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.27■□□□□ 0.35
CAPN3P20807 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPN3P20807 AC124067.4-201ENST00000519691 2379 ntBASIC17.26■□□□□ 0.35
CAPN3P20807 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 AC132938.6-201ENST00000623828 1655 ntBASIC17.26■□□□□ 0.35
CAPN3P20807 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.26■□□□□ 0.35
CAPN3P20807 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 CRYGFP-201ENST00000418459 633 ntBASIC17.26■□□□□ 0.35
CAPN3P20807 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CAPN3P20807 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms