Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.38■■□□□ 1.01
NCLP19338 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.38■■□□□ 1.01
NCLP19338 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.38■■□□□ 1.01
NCLP19338 REXO1L10P-201ENST00000615707 1290 ntBASIC21.38■■□□□ 1.01
NCLP19338 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.38■■□□□ 1.01
NCLP19338 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.38■■□□□ 1.01
NCLP19338 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NCLP19338 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
NCLP19338 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
NCLP19338 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NCLP19338 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NCLP19338 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NCLP19338 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NCLP19338 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
NCLP19338 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 AC108860.2-201ENST00000562760 2183 ntBASIC21.37■■□□□ 1.01
NCLP19338 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.37■■□□□ 1.01
NCLP19338 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.37■■□□□ 1.01
NCLP19338 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.37■■□□□ 1.01
NCLP19338 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.37■■□□□ 1.01
NCLP19338 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 AC116562.2-201ENST00000507042 360 ntBASIC21.37■■□□□ 1.01
NCLP19338 CKBP1-201ENST00000565489 1086 ntBASIC21.37■■□□□ 1.01
NCLP19338 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.37■■□□□ 1.01
NCLP19338 AC133561.5-201ENST00000635547 218 ntBASIC21.37■■□□□ 1.01
NCLP19338 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NCLP19338 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.37■■□□□ 1.01
NCLP19338 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
NCLP19338 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.37■■□□□ 1.01
NCLP19338 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.37■■□□□ 1.01
NCLP19338 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.37■■□□□ 1.01
NCLP19338 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.37■■□□□ 1.01
NCLP19338 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NCLP19338 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC21.37■■□□□ 1.01
NCLP19338 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.37■■□□□ 1.01
NCLP19338 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.37■■□□□ 1.01
NCLP19338 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.36■■□□□ 1.01
NCLP19338 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NCLP19338 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 RBM17P1-201ENST00000453646 1190 ntBASIC21.36■■□□□ 1.01
NCLP19338 AC008040.2-201ENST00000461049 708 ntBASIC21.36■■□□□ 1.01
NCLP19338 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 AC012306.2-201ENST00000609350 630 ntBASIC21.36■■□□□ 1.01
NCLP19338 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NCLP19338 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NCLP19338 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCLP19338 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NCLP19338 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
NCLP19338 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NCLP19338 FLJ13224-201ENST00000313737 1514 ntBASIC21.35■■□□□ 1.01
NCLP19338 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCLP19338 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NCLP19338 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NCLP19338 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCLP19338 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.35■■□□□ 1.01
NCLP19338 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCLP19338 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCLP19338 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
NCLP19338 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.35■■□□□ 1.01
NCLP19338 MMP23A-201ENST00000234610 1017 ntBASIC21.35■■□□□ 1.01
NCLP19338 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NCLP19338 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.35■■□□□ 1.01
NCLP19338 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.35■■□□□ 1.01
NCLP19338 FAM207BP-201ENST00000447172 505 ntBASIC21.35■■□□□ 1.01
NCLP19338 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.35■■□□□ 1.01
NCLP19338 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms