Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ARMC10P1-201ENST00000313754 855 ntBASIC18.47■□□□□ 0.55
ERCC2P18074 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 MTCL1P1-201ENST00000446207 792 ntBASIC18.47■□□□□ 0.55
ERCC2P18074 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 AC112698.1-201ENST00000510299 916 ntBASIC18.47■□□□□ 0.55
ERCC2P18074 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.47■□□□□ 0.55
ERCC2P18074 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
ERCC2P18074 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.47■□□□□ 0.55
ERCC2P18074 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.47■□□□□ 0.55
ERCC2P18074 KRT8P26-201ENST00000534154 1276 ntBASIC18.47■□□□□ 0.55
ERCC2P18074 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.47■□□□□ 0.55
ERCC2P18074 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.47■□□□□ 0.55
ERCC2P18074 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ERCC2P18074 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.47■□□□□ 0.55
ERCC2P18074 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.47■□□□□ 0.55
ERCC2P18074 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ERCC2P18074 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.47■□□□□ 0.55
ERCC2P18074 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 AC006116.8-202ENST00000587620 1550 ntBASIC18.47■□□□□ 0.55
ERCC2P18074 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC2P18074 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ERCC2P18074 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ERCC2P18074 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
ERCC2P18074 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC2P18074 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.46■□□□□ 0.55
ERCC2P18074 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC2P18074 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ERCC2P18074 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 HCG11-201ENST00000411553 5696 ntBASIC18.46■□□□□ 0.55
ERCC2P18074 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ERCC2P18074 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.46■□□□□ 0.55
ERCC2P18074 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.46■□□□□ 0.55
ERCC2P18074 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC2P18074 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC2P18074 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ERCC2P18074 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
ERCC2P18074 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
ERCC2P18074 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ERCC2P18074 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ERCC2P18074 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 IER3-202ENST00000376377 1350 ntBASIC18.45■□□□□ 0.54
ERCC2P18074 HTR7P1-202ENST00000624664 4411 ntBASIC18.45■□□□□ 0.54
ERCC2P18074 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.45■□□□□ 0.54
ERCC2P18074 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
ERCC2P18074 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.45■□□□□ 0.54
ERCC2P18074 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.45■□□□□ 0.54
ERCC2P18074 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.45■□□□□ 0.54
ERCC2P18074 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.45■□□□□ 0.54
ERCC2P18074 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ERCC2P18074 RN7SL606P-201ENST00000472779 293 ntBASIC18.45■□□□□ 0.54
ERCC2P18074 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.45■□□□□ 0.54
ERCC2P18074 GUSBP12-201ENST00000513727 720 ntBASIC18.45■□□□□ 0.54
ERCC2P18074 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.45■□□□□ 0.54
ERCC2P18074 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ERCC2P18074 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ERCC2P18074 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ERCC2P18074 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ERCC2P18074 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC2P18074 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ERCC2P18074 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC2P18074 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC2P18074 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC2P18074 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC2P18074 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC2P18074 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC2P18074 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.44■□□□□ 0.54
ERCC2P18074 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.44■□□□□ 0.54
ERCC2P18074 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC2P18074 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC2P18074 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC2P18074 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms