Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFRAP16234 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFRAP16234 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.85■□□□□ 0.61
PDGFRAP16234 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.85■□□□□ 0.61
PDGFRAP16234 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.85■□□□□ 0.61
PDGFRAP16234 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.85■□□□□ 0.61
PDGFRAP16234 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.85■□□□□ 0.61
PDGFRAP16234 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.85■□□□□ 0.61
PDGFRAP16234 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDGFRAP16234 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFRAP16234 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PDGFRAP16234 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PDGFRAP16234 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFRAP16234 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFRAP16234 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDGFRAP16234 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 AC100803.2-201ENST00000562459 1963 ntBASIC18.84■□□□□ 0.61
PDGFRAP16234 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDGFRAP16234 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.84■□□□□ 0.61
PDGFRAP16234 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PDGFRAP16234 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDGFRAP16234 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.84■□□□□ 0.61
PDGFRAP16234 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.84■□□□□ 0.61
PDGFRAP16234 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.84■□□□□ 0.61
PDGFRAP16234 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.84■□□□□ 0.61
PDGFRAP16234 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.84■□□□□ 0.61
PDGFRAP16234 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.84■□□□□ 0.61
PDGFRAP16234 Z83836.1-201ENST00000624605 1642 ntBASIC18.84■□□□□ 0.61
PDGFRAP16234 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.84■□□□□ 0.61
PDGFRAP16234 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PDGFRAP16234 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.84■□□□□ 0.61
PDGFRAP16234 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFRAP16234 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDGFRAP16234 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDGFRAP16234 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PDGFRAP16234 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFRAP16234 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFRAP16234 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.83■□□□□ 0.61
PDGFRAP16234 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.83■□□□□ 0.61
PDGFRAP16234 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFRAP16234 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFRAP16234 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.83■□□□□ 0.61
PDGFRAP16234 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFRAP16234 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.83■□□□□ 0.61
PDGFRAP16234 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.83■□□□□ 0.61
PDGFRAP16234 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFRAP16234 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFRAP16234 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFRAP16234 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PDGFRAP16234 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.83■□□□□ 0.61
PDGFRAP16234 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PDGFRAP16234 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFRAP16234 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PDGFRAP16234 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFRAP16234 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.83■□□□□ 0.6
PDGFRAP16234 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFRAP16234 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFRAP16234 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.83■□□□□ 0.6
PDGFRAP16234 AL390719.2-201ENST00000606993 987 ntBASIC18.83■□□□□ 0.6
PDGFRAP16234 AC009154.2-201ENST00000621177 724 ntBASIC18.83■□□□□ 0.6
PDGFRAP16234 AC093458.2-201ENST00000623150 629 ntBASIC18.83■□□□□ 0.6
PDGFRAP16234 AC134043.2-201ENST00000624206 2238 ntBASIC18.83■□□□□ 0.6
PDGFRAP16234 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFRAP16234 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFRAP16234 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFRAP16234 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PDGFRAP16234 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFRAP16234 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFRAP16234 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PDGFRAP16234 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PDGFRAP16234 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDGFRAP16234 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDGFRAP16234 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.82■□□□□ 0.6
PDGFRAP16234 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFRAP16234 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFRAP16234 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFRAP16234 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.82■□□□□ 0.6
PDGFRAP16234 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.82■□□□□ 0.6
PDGFRAP16234 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFRAP16234 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms