Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB1P11230 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRNB1P11230 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHRNB1P11230 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB1P11230 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRNB1P11230 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHRNB1P11230 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB1P11230 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRNB1P11230 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.14■□□□□ 0.49
CHRNB1P11230 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.14■□□□□ 0.49
CHRNB1P11230 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHRNB1P11230 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CHRNB1P11230 AC022898.2-201ENST00000616822 1312 ntBASIC18.14■□□□□ 0.49
CHRNB1P11230 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRNB1P11230 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CHRNB1P11230 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRNB1P11230 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.13■□□□□ 0.49
CHRNB1P11230 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 PMPCAP1-201ENST00000508114 1576 ntBASIC18.13■□□□□ 0.49
CHRNB1P11230 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRNB1P11230 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CHRNB1P11230 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.13■□□□□ 0.49
CHRNB1P11230 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHRNB1P11230 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHRNB1P11230 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHRNB1P11230 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRNB1P11230 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB1P11230 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB1P11230 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHRNB1P11230 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB1P11230 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRNB1P11230 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRNB1P11230 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRNB1P11230 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRNB1P11230 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRNB1P11230 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB1P11230 BX323043.1-201ENST00000641006 1765 ntBASIC18.12■□□□□ 0.49
CHRNB1P11230 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNB1P11230 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB1P11230 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB1P11230 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHRNB1P11230 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHRNB1P11230 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CHRNB1P11230 AC073621.1-201ENST00000392730 636 ntBASIC18.12■□□□□ 0.49
CHRNB1P11230 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CHRNB1P11230 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNB1P11230 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.12■□□□□ 0.49
CHRNB1P11230 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.12■□□□□ 0.49
CHRNB1P11230 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB1P11230 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNB1P11230 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CHRNB1P11230 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNB1P11230 AC064836.3-201ENST00000607928 673 ntBASIC18.12■□□□□ 0.49
CHRNB1P11230 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
CHRNB1P11230 MIR1199-201ENST00000621445 119 ntBASIC18.12■□□□□ 0.49
CHRNB1P11230 AC073592.4-201ENST00000623827 446 ntBASIC18.12■□□□□ 0.49
CHRNB1P11230 AC005593.1-201ENST00000624894 515 ntBASIC18.12■□□□□ 0.49
CHRNB1P11230 PGM5P2-202ENST00000637225 1043 ntBASIC18.12■□□□□ 0.49
CHRNB1P11230 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CHRNB1P11230 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRNB1P11230 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.12■□□□□ 0.49
CHRNB1P11230 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRNB1P11230 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB1P11230 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CHRNB1P11230 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB1P11230 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHRNB1P11230 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRNB1P11230 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRNB1P11230 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRNB1P11230 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.11■□□□□ 0.49
CHRNB1P11230 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRNB1P11230 AC211486.1-202ENST00000416371 468 ntBASIC18.11■□□□□ 0.49
CHRNB1P11230 PRYP5-201ENST00000451909 266 ntBASIC18.11■□□□□ 0.49
CHRNB1P11230 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms