Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.05■□□□□ 0.48
MMP2P08253 TPSP2-201ENST00000561760 610 ntBASIC18.05■□□□□ 0.48
MMP2P08253 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP2P08253 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MMP2P08253 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP2P08253 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP2P08253 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP2P08253 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.05■□□□□ 0.48
MMP2P08253 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP2P08253 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MMP2P08253 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP2P08253 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 DRAXINP1-201ENST00000437611 948 ntBASIC18.04■□□□□ 0.48
MMP2P08253 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.04■□□□□ 0.48
MMP2P08253 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP2P08253 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
MMP2P08253 AP002414.4-201ENST00000589764 1148 ntBASIC18.04■□□□□ 0.48
MMP2P08253 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 AC069148.1-201ENST00000608741 768 ntBASIC18.04■□□□□ 0.48
MMP2P08253 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
MMP2P08253 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP2P08253 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.04■□□□□ 0.48
MMP2P08253 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP2P08253 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
MMP2P08253 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 KRT18P1-202ENST00000452408 1331 ntBASIC18.03■□□□□ 0.48
MMP2P08253 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP2P08253 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MMP2P08253 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP2P08253 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
MMP2P08253 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 AC096633.1-201ENST00000422446 749 ntBASIC18.03■□□□□ 0.48
MMP2P08253 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.03■□□□□ 0.48
MMP2P08253 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.03■□□□□ 0.48
MMP2P08253 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.03■□□□□ 0.48
MMP2P08253 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP2P08253 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.03■□□□□ 0.48
MMP2P08253 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP2P08253 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP2P08253 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP2P08253 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
MMP2P08253 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP2P08253 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP2P08253 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP2P08253 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP2P08253 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP2P08253 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP2P08253 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
MMP2P08253 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP2P08253 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
MMP2P08253 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP2P08253 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP2P08253 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP2P08253 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.02■□□□□ 0.48
MMP2P08253 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.02■□□□□ 0.48
MMP2P08253 DDX43P3-201ENST00000441064 443 ntBASIC18.02■□□□□ 0.48
MMP2P08253 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP2P08253 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP2P08253 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP2P08253 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP2P08253 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP2P08253 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms