Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN1P07384 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CAPN1P07384 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN1P07384 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.69■□□□□ 0.42
CAPN1P07384 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CAPN1P07384 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN1P07384 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CAPN1P07384 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN1P07384 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CAPN1P07384 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.68■□□□□ 0.42
CAPN1P07384 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CAPN1P07384 HBZP1-201ENST00000354915 429 ntBASIC17.68■□□□□ 0.42
CAPN1P07384 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CAPN1P07384 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
CAPN1P07384 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN1P07384 RASA4DP-201ENST00000460726 1199 ntBASIC17.68■□□□□ 0.42
CAPN1P07384 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.68■□□□□ 0.42
CAPN1P07384 AC024243.1-201ENST00000609234 778 ntBASIC17.68■□□□□ 0.42
CAPN1P07384 AC112497.1-201ENST00000624824 639 ntBASIC17.68■□□□□ 0.42
CAPN1P07384 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.68■□□□□ 0.42
CAPN1P07384 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN1P07384 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 LINC01126-201ENST00000623515 1646 ntBASIC17.68■□□□□ 0.42
CAPN1P07384 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN1P07384 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN1P07384 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CAPN1P07384 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CAPN1P07384 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
CAPN1P07384 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 AC092597.1-201ENST00000487352 616 ntBASIC17.67■□□□□ 0.42
CAPN1P07384 AC104390.1-201ENST00000555663 520 ntBASIC17.67■□□□□ 0.42
CAPN1P07384 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.67■□□□□ 0.42
CAPN1P07384 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CAPN1P07384 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.67■□□□□ 0.42
CAPN1P07384 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.67■□□□□ 0.42
CAPN1P07384 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CAPN1P07384 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN1P07384 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CAPN1P07384 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN1P07384 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 SEC1P-202ENST00000473944 940 ntBASIC17.66■□□□□ 0.42
CAPN1P07384 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.66■□□□□ 0.42
CAPN1P07384 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms