Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM3P06753 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TPM3P06753 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM3P06753 AC130371.2-201ENST00000619443 611 ntBASIC20.15■□□□□ 0.82
TPM3P06753 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TPM3P06753 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
TPM3P06753 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM3P06753 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM3P06753 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TPM3P06753 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TPM3P06753 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.15■□□□□ 0.82
TPM3P06753 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TPM3P06753 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.14■□□□□ 0.82
TPM3P06753 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
TPM3P06753 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TPM3P06753 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TPM3P06753 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.14■□□□□ 0.81
TPM3P06753 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
TPM3P06753 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.14■□□□□ 0.81
TPM3P06753 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.14■□□□□ 0.81
TPM3P06753 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TPM3P06753 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TPM3P06753 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TPM3P06753 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.14■□□□□ 0.81
TPM3P06753 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM3P06753 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TPM3P06753 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.14■□□□□ 0.81
TPM3P06753 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.14■□□□□ 0.81
TPM3P06753 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.13■□□□□ 0.81
TPM3P06753 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM3P06753 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 AC009102.3-201ENST00000623118 1491 ntBASIC20.13■□□□□ 0.81
TPM3P06753 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM3P06753 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TPM3P06753 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.13■□□□□ 0.81
TPM3P06753 AL023284.2-201ENST00000405850 579 ntBASIC20.13■□□□□ 0.81
TPM3P06753 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 CR392000.1-201ENST00000624770 1228 ntBASIC20.13■□□□□ 0.81
TPM3P06753 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM3P06753 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
TPM3P06753 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.13■□□□□ 0.81
TPM3P06753 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.13■□□□□ 0.81
TPM3P06753 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM3P06753 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TPM3P06753 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM3P06753 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM3P06753 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TPM3P06753 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.12■□□□□ 0.81
TPM3P06753 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
TPM3P06753 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TPM3P06753 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TPM3P06753 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM3P06753 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TPM3P06753 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms