Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC092902.6-201ENST00000641783 218 ntBASIC23.45■■□□□ 1.34
COL5A2P05997 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL5A2P05997 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL5A2P05997 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL5A2P05997 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL5A2P05997 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL5A2P05997 PHGDH-209ENST00000641074 1780 ntBASIC23.45■■□□□ 1.34
COL5A2P05997 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
COL5A2P05997 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL5A2P05997 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL5A2P05997 AP002414.1-201ENST00000391405 1147 ntBASIC23.44■■□□□ 1.34
COL5A2P05997 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
COL5A2P05997 ADH5P3-201ENST00000433842 1137 ntBASIC23.44■■□□□ 1.34
COL5A2P05997 COX20P2-201ENST00000452636 358 ntBASIC23.44■■□□□ 1.34
COL5A2P05997 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC23.44■■□□□ 1.34
COL5A2P05997 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL5A2P05997 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL5A2P05997 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
COL5A2P05997 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL5A2P05997 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL5A2P05997 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
COL5A2P05997 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC23.44■■□□□ 1.34
COL5A2P05997 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL5A2P05997 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC23.43■■□□□ 1.34
COL5A2P05997 DUTP2-201ENST00000519164 463 ntBASIC23.43■■□□□ 1.34
COL5A2P05997 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
COL5A2P05997 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.34
COL5A2P05997 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.43■■□□□ 1.34
COL5A2P05997 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC23.43■■□□□ 1.34
COL5A2P05997 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC23.43■■□□□ 1.34
COL5A2P05997 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL5A2P05997 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
COL5A2P05997 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC23.43■■□□□ 1.34
COL5A2P05997 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.42■■□□□ 1.34
COL5A2P05997 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 AC018445.3-201ENST00000624177 1945 ntBASIC23.42■■□□□ 1.34
COL5A2P05997 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC23.42■■□□□ 1.34
COL5A2P05997 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 PTCHD3P3-201ENST00000403073 906 ntBASIC23.42■■□□□ 1.34
COL5A2P05997 AC004461.1-201ENST00000412461 403 ntBASIC23.42■■□□□ 1.34
COL5A2P05997 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC23.42■■□□□ 1.34
COL5A2P05997 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.42■■□□□ 1.34
COL5A2P05997 AC005498.2-205ENST00000593218 784 ntBASIC23.42■■□□□ 1.34
COL5A2P05997 AC239800.4-201ENST00000603712 296 ntBASIC23.42■■□□□ 1.34
COL5A2P05997 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.42■■□□□ 1.34
COL5A2P05997 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL5A2P05997 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC23.41■■□□□ 1.34
COL5A2P05997 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL5A2P05997 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
COL5A2P05997 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL5A2P05997 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL5A2P05997 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL5A2P05997 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL5A2P05997 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL5A2P05997 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL5A2P05997 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC23.41■■□□□ 1.34
COL5A2P05997 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
COL5A2P05997 AL353135.1-201ENST00000606729 504 ntBASIC23.41■■□□□ 1.34
COL5A2P05997 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.41■■□□□ 1.34
COL5A2P05997 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL5A2P05997 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC23.41■■□□□ 1.34
COL5A2P05997 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.41■■□□□ 1.34
COL5A2P05997 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.4■■□□□ 1.34
COL5A2P05997 AC025580.3-201ENST00000617932 1424 ntBASIC23.4■■□□□ 1.34
COL5A2P05997 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL5A2P05997 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL5A2P05997 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.4■■□□□ 1.34
COL5A2P05997 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.4■■□□□ 1.34
COL5A2P05997 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.4■■□□□ 1.34
COL5A2P05997 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.4■■□□□ 1.34
COL5A2P05997 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL5A2P05997 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL5A2P05997 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL5A2P05997 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL5A2P05997 STK25P1-201ENST00000585406 838 ntBASIC23.4■■□□□ 1.34
COL5A2P05997 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC23.4■■□□□ 1.34
COL5A2P05997 AC068137.2-201ENST00000605408 478 ntBASIC23.4■■□□□ 1.34
COL5A2P05997 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC23.4■■□□□ 1.34
COL5A2P05997 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL5A2P05997 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms