Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.81■■□□□ 1.08
COL4A1P02462 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A1P02462 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A1P02462 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A1P02462 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.81■■□□□ 1.08
COL4A1P02462 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A1P02462 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A1P02462 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL4A1P02462 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.8■■□□□ 1.08
COL4A1P02462 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
COL4A1P02462 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.8■■□□□ 1.08
COL4A1P02462 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A1P02462 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A1P02462 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.8■■□□□ 1.08
COL4A1P02462 AC006557.2-201ENST00000592985 1240 ntBASIC21.8■■□□□ 1.08
COL4A1P02462 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.8■■□□□ 1.08
COL4A1P02462 AC092865.6-201ENST00000642101 219 ntBASIC21.8■■□□□ 1.08
COL4A1P02462 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A1P02462 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COL4A1P02462 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
COL4A1P02462 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A1P02462 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.8■■□□□ 1.08
COL4A1P02462 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
COL4A1P02462 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.79■■□□□ 1.08
COL4A1P02462 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL4A1P02462 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 IGLL3P-201ENST00000412472 434 ntBASIC21.79■■□□□ 1.08
COL4A1P02462 RNA5SP416-201ENST00000516838 111 ntBASIC21.79■■□□□ 1.08
COL4A1P02462 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A1P02462 AC004706.3-202ENST00000621574 984 ntBASIC21.79■■□□□ 1.08
COL4A1P02462 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.79■■□□□ 1.08
COL4A1P02462 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A1P02462 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
COL4A1P02462 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A1P02462 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A1P02462 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A1P02462 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A1P02462 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A1P02462 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A1P02462 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A1P02462 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A1P02462 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A1P02462 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.79■■□□□ 1.08
COL4A1P02462 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A1P02462 AL513190.1-201ENST00000621254 727 ntBASIC21.79■■□□□ 1.08
COL4A1P02462 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A1P02462 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A1P02462 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.78■■□□□ 1.08
COL4A1P02462 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.78■■□□□ 1.08
COL4A1P02462 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
COL4A1P02462 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A1P02462 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
COL4A1P02462 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
COL4A1P02462 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
COL4A1P02462 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A1P02462 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.78■■□□□ 1.08
COL4A1P02462 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A1P02462 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
COL4A1P02462 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A1P02462 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.78■■□□□ 1.08
COL4A1P02462 COX5BP2-201ENST00000392354 334 ntBASIC21.78■■□□□ 1.08
COL4A1P02462 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.78■■□□□ 1.08
COL4A1P02462 PRYP5-201ENST00000451909 266 ntBASIC21.78■■□□□ 1.08
COL4A1P02462 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.78■■□□□ 1.08
COL4A1P02462 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.78■■□□□ 1.08
COL4A1P02462 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.78■■□□□ 1.08
COL4A1P02462 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.78■■□□□ 1.08
COL4A1P02462 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.78■■□□□ 1.08
COL4A1P02462 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
COL4A1P02462 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.78■■□□□ 1.08
COL4A1P02462 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A1P02462 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.78■■□□□ 1.08
COL4A1P02462 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A1P02462 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A1P02462 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A1P02462 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A1P02462 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.77■■□□□ 1.08
COL4A1P02462 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.77■■□□□ 1.08
COL4A1P02462 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A1P02462 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A1P02462 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.77■■□□□ 1.08
COL4A1P02462 DNAJB3-202ENST00000449667 1266 ntBASIC21.77■■□□□ 1.08
COL4A1P02462 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.77■■□□□ 1.08
COL4A1P02462 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
COL4A1P02462 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.77■■□□□ 1.08
COL4A1P02462 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.77■■□□□ 1.08
COL4A1P02462 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.77■■□□□ 1.08
COL4A1P02462 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.77■■□□□ 1.08
COL4A1P02462 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.77■■□□□ 1.08
COL4A1P02462 AC134684.3-201ENST00000641758 218 ntBASIC21.77■■□□□ 1.08
COL4A1P02462 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.77■■□□□ 1.08
COL4A1P02462 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms