Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
HERC2O95714 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
HERC2O95714 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC10.95□□□□□ -0.66
HERC2O95714 RN7SL219P-201ENST00000582872 296 ntBASIC10.95□□□□□ -0.66
HERC2O95714 RNA5-8SN1-201ENST00000610460 153 ntBASIC10.95□□□□□ -0.66
HERC2O95714 RNA5-8SN5-202ENST00000612463 153 ntBASIC10.95□□□□□ -0.66
HERC2O95714 RNA5-8SN4-201ENST00000613359 153 ntBASIC10.95□□□□□ -0.66
HERC2O95714 RNA5-8SN5-201ENST00000619471 153 ntBASIC10.95□□□□□ -0.66
HERC2O95714 AC015967.2-201ENST00000624092 234 ntBASIC10.95□□□□□ -0.66
HERC2O95714 AC006435.4-201ENST00000625037 234 ntBASIC10.95□□□□□ -0.66
HERC2O95714 AL356737.1-201ENST00000634391 234 ntBASIC10.95□□□□□ -0.66
HERC2O95714 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC10.95□□□□□ -0.66
HERC2O95714 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
HERC2O95714 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.95□□□□□ -0.66
HERC2O95714 AC093525.8-201ENST00000624099 1342 ntBASIC10.95□□□□□ -0.66
HERC2O95714 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HERC2O95714 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HERC2O95714 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
HERC2O95714 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HERC2O95714 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC10.95□□□□□ -0.66
HERC2O95714 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
HERC2O95714 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC10.95□□□□□ -0.66
HERC2O95714 AC106872.11-201ENST00000605838 421 ntBASIC10.95□□□□□ -0.66
HERC2O95714 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
HERC2O95714 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC10.95□□□□□ -0.66
HERC2O95714 UXT-AS1-201ENST00000590504 1525 ntBASIC10.95□□□□□ -0.66
HERC2O95714 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HERC2O95714 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
HERC2O95714 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HERC2O95714 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.95□□□□□ -0.66
HERC2O95714 AC073592.8-201ENST00000624126 511 ntBASIC10.95□□□□□ -0.66
HERC2O95714 AC004840.1-201ENST00000636359 365 ntBASIC10.95□□□□□ -0.66
HERC2O95714 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC10.95□□□□□ -0.66
HERC2O95714 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
HERC2O95714 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
HERC2O95714 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC10.94□□□□□ -0.66
HERC2O95714 AC108725.1-201ENST00000495472 409 ntBASIC10.94□□□□□ -0.66
HERC2O95714 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC10.94□□□□□ -0.66
HERC2O95714 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.94□□□□□ -0.66
HERC2O95714 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC10.94□□□□□ -0.66
HERC2O95714 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC10.94□□□□□ -0.66
HERC2O95714 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC10.94□□□□□ -0.66
HERC2O95714 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.94□□□□□ -0.66
HERC2O95714 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC10.94□□□□□ -0.66
HERC2O95714 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC10.94□□□□□ -0.66
HERC2O95714 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC10.94□□□□□ -0.66
HERC2O95714 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
HERC2O95714 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC10.94□□□□□ -0.66
HERC2O95714 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.94□□□□□ -0.66
HERC2O95714 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC10.94□□□□□ -0.66
HERC2O95714 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC10.94□□□□□ -0.66
HERC2O95714 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC10.94□□□□□ -0.66
HERC2O95714 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC10.94□□□□□ -0.66
HERC2O95714 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HERC2O95714 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HERC2O95714 MPV17-204ENST00000399052 749 ntTSL 4 BASIC10.93□□□□□ -0.66
HERC2O95714 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HERC2O95714 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HERC2O95714 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.93□□□□□ -0.66
HERC2O95714 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HERC2O95714 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HERC2O95714 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC10.93□□□□□ -0.66
HERC2O95714 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HERC2O95714 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC10.93□□□□□ -0.66
HERC2O95714 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.93□□□□□ -0.66
HERC2O95714 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.93□□□□□ -0.66
HERC2O95714 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC10.93□□□□□ -0.66
HERC2O95714 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HERC2O95714 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
HERC2O95714 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
HERC2O95714 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
HERC2O95714 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC10.93□□□□□ -0.66
HERC2O95714 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC10.93□□□□□ -0.66
HERC2O95714 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC10.93□□□□□ -0.66
HERC2O95714 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC10.93□□□□□ -0.66
HERC2O95714 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.93□□□□□ -0.66
HERC2O95714 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms