Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAPBO95292 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VAPBO95292 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VAPBO95292 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAPBO95292 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAPBO95292 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.05■□□□□ 0.48
VAPBO95292 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VAPBO95292 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.05■□□□□ 0.48
VAPBO95292 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.05■□□□□ 0.48
VAPBO95292 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
VAPBO95292 AL136038.4-201ENST00000603606 1261 ntBASIC18.05■□□□□ 0.48
VAPBO95292 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VAPBO95292 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VAPBO95292 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.05■□□□□ 0.48
VAPBO95292 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VAPBO95292 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VAPBO95292 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.05■□□□□ 0.48
VAPBO95292 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAPBO95292 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
VAPBO95292 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VAPBO95292 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.04■□□□□ 0.48
VAPBO95292 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VAPBO95292 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAPBO95292 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAPBO95292 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
VAPBO95292 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.04■□□□□ 0.48
VAPBO95292 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.04■□□□□ 0.48
VAPBO95292 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.04■□□□□ 0.48
VAPBO95292 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.04■□□□□ 0.48
VAPBO95292 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.04■□□□□ 0.48
VAPBO95292 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.04■□□□□ 0.48
VAPBO95292 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.04■□□□□ 0.48
VAPBO95292 SPDYE15P-201ENST00000424157 909 ntBASIC18.04■□□□□ 0.48
VAPBO95292 AC117947.1-201ENST00000427448 529 ntBASIC18.04■□□□□ 0.48
VAPBO95292 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.04■□□□□ 0.48
VAPBO95292 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.04■□□□□ 0.48
VAPBO95292 KRT18P57-201ENST00000443599 1254 ntBASIC18.04■□□□□ 0.48
VAPBO95292 AC113404.2-201ENST00000507884 177 ntBASIC18.04■□□□□ 0.48
VAPBO95292 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.04■□□□□ 0.48
VAPBO95292 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
VAPBO95292 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.04■□□□□ 0.48
VAPBO95292 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAPBO95292 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
VAPBO95292 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.04■□□□□ 0.48
VAPBO95292 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
VAPBO95292 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VAPBO95292 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAPBO95292 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.04■□□□□ 0.48
VAPBO95292 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
VAPBO95292 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAPBO95292 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 AC022898.2-201ENST00000616822 1312 ntBASIC18.03■□□□□ 0.48
VAPBO95292 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 STARP1-201ENST00000397973 869 ntBASIC18.03■□□□□ 0.48
VAPBO95292 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.03■□□□□ 0.48
VAPBO95292 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.03■□□□□ 0.48
VAPBO95292 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.03■□□□□ 0.48
VAPBO95292 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.03■□□□□ 0.48
VAPBO95292 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.03■□□□□ 0.48
VAPBO95292 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.03■□□□□ 0.48
VAPBO95292 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 AC139713.2-201ENST00000641328 2723 ntBASIC18.03■□□□□ 0.48
VAPBO95292 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VAPBO95292 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.03■□□□□ 0.48
VAPBO95292 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VAPBO95292 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms