Protein–RNA interactions for Protein: O95260

ATE1, Arginyl-tRNA--protein transferase 1, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATE1O95260 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATE1O95260 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATE1O95260 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATE1O95260 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATE1O95260 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
ATE1O95260 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATE1O95260 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATE1O95260 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATE1O95260 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.84■□□□□ 0.29
ATE1O95260 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATE1O95260 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATE1O95260 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATE1O95260 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
ATE1O95260 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATE1O95260 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.83■□□□□ 0.29
ATE1O95260 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
ATE1O95260 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ATE1O95260 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATE1O95260 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATE1O95260 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATE1O95260 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.83■□□□□ 0.28
ATE1O95260 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATE1O95260 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATE1O95260 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATE1O95260 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
ATE1O95260 AK4P3-201ENST00000418260 669 ntBASIC16.83■□□□□ 0.28
ATE1O95260 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.83■□□□□ 0.28
ATE1O95260 KRT8P8-201ENST00000434750 1448 ntBASIC16.83■□□□□ 0.28
ATE1O95260 BX664615.1-201ENST00000443558 458 ntBASIC16.83■□□□□ 0.28
ATE1O95260 B3GAT3P1-201ENST00000471720 806 ntBASIC16.83■□□□□ 0.28
ATE1O95260 AC128688.1-201ENST00000487626 519 ntBASIC16.83■□□□□ 0.28
ATE1O95260 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATE1O95260 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
ATE1O95260 AC022616.7-201ENST00000525383 220 ntBASIC16.83■□□□□ 0.28
ATE1O95260 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.83■□□□□ 0.28
ATE1O95260 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 AL121761.2-201ENST00000598007 1648 ntBASIC16.83■□□□□ 0.28
ATE1O95260 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ATE1O95260 AL023806.1-201ENST00000603994 1649 ntBASIC16.83■□□□□ 0.28
ATE1O95260 AC091076.1-201ENST00000610741 619 ntBASIC16.83■□□□□ 0.28
ATE1O95260 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.83■□□□□ 0.28
ATE1O95260 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
ATE1O95260 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATE1O95260 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.83■□□□□ 0.28
ATE1O95260 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.82■□□□□ 0.28
ATE1O95260 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATE1O95260 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATE1O95260 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATE1O95260 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.82■□□□□ 0.28
ATE1O95260 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.82■□□□□ 0.28
ATE1O95260 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.82■□□□□ 0.28
ATE1O95260 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.82■□□□□ 0.28
ATE1O95260 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.82■□□□□ 0.28
ATE1O95260 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.82■□□□□ 0.28
ATE1O95260 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.82■□□□□ 0.28
ATE1O95260 AL358472.4-201ENST00000633140 710 ntBASIC16.82■□□□□ 0.28
ATE1O95260 AL513477.1-201ENST00000602865 2407 ntBASIC16.82■□□□□ 0.28
ATE1O95260 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.82■□□□□ 0.28
ATE1O95260 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.82■□□□□ 0.28
ATE1O95260 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATE1O95260 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.82■□□□□ 0.28
ATE1O95260 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.82■□□□□ 0.28
ATE1O95260 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.82■□□□□ 0.28
ATE1O95260 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATE1O95260 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATE1O95260 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.81■□□□□ 0.28
ATE1O95260 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.81■□□□□ 0.28
ATE1O95260 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATE1O95260 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ATE1O95260 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.81■□□□□ 0.28
ATE1O95260 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.81■□□□□ 0.28
ATE1O95260 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ATE1O95260 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms