Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.64■□□□□ 0.1
UPK1BO75841 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1BO75841 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1BO75841 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
UPK1BO75841 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
UPK1BO75841 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.64■□□□□ 0.09
UPK1BO75841 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
UPK1BO75841 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1BO75841 MIR939-201ENST00000401314 82 ntBASIC15.64■□□□□ 0.09
UPK1BO75841 AC027612.3-201ENST00000413684 1047 ntBASIC15.64■□□□□ 0.09
UPK1BO75841 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1BO75841 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1BO75841 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.64■□□□□ 0.09
UPK1BO75841 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
UPK1BO75841 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
UPK1BO75841 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
UPK1BO75841 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UPK1BO75841 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.64■□□□□ 0.09
UPK1BO75841 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.64■□□□□ 0.09
UPK1BO75841 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
UPK1BO75841 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.63■□□□□ 0.09
UPK1BO75841 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
UPK1BO75841 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
UPK1BO75841 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1BO75841 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
UPK1BO75841 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 GPX1P1-201ENST00000388829 606 ntBASIC15.63■□□□□ 0.09
UPK1BO75841 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.63■□□□□ 0.09
UPK1BO75841 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 AL390719.1-204ENST00000412397 1219 ntBASIC15.63■□□□□ 0.09
UPK1BO75841 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UPK1BO75841 AL160286.2-201ENST00000567150 934 ntBASIC15.63■□□□□ 0.09
UPK1BO75841 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.63■□□□□ 0.09
UPK1BO75841 LINC02228-204ENST00000642115 2962 ntBASIC15.63■□□□□ 0.09
UPK1BO75841 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
UPK1BO75841 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1BO75841 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1BO75841 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
UPK1BO75841 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UPK1BO75841 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.63■□□□□ 0.09
UPK1BO75841 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
UPK1BO75841 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.62■□□□□ 0.09
UPK1BO75841 AC099063.4-201ENST00000641099 1602 ntBASIC15.62■□□□□ 0.09
UPK1BO75841 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
UPK1BO75841 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
UPK1BO75841 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 AP000593.1-201ENST00000393668 712 ntBASIC15.62■□□□□ 0.09
UPK1BO75841 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
UPK1BO75841 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.62■□□□□ 0.09
UPK1BO75841 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
UPK1BO75841 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.62■□□□□ 0.09
UPK1BO75841 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UPK1BO75841 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms