Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.24■□□□□ 0.35
CPNE3O75131 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
CPNE3O75131 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPNE3O75131 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CPNE3O75131 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CPNE3O75131 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CPNE3O75131 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 TSPY12P-201ENST00000421279 868 ntBASIC17.23■□□□□ 0.35
CPNE3O75131 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.23■□□□□ 0.35
CPNE3O75131 EMBP1-201ENST00000458200 901 ntBASIC17.23■□□□□ 0.35
CPNE3O75131 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.23■□□□□ 0.35
CPNE3O75131 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CPNE3O75131 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.23■□□□□ 0.35
CPNE3O75131 AP005901.3-202ENST00000581653 237 ntBASIC17.23■□□□□ 0.35
CPNE3O75131 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.23■□□□□ 0.35
CPNE3O75131 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.23■□□□□ 0.35
CPNE3O75131 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CPNE3O75131 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPNE3O75131 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CPNE3O75131 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE3O75131 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
CPNE3O75131 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.22■□□□□ 0.35
CPNE3O75131 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.22■□□□□ 0.35
CPNE3O75131 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.22■□□□□ 0.35
CPNE3O75131 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.22■□□□□ 0.35
CPNE3O75131 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.22■□□□□ 0.35
CPNE3O75131 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.22■□□□□ 0.35
CPNE3O75131 AL024508.2-201ENST00000607749 1894 ntBASIC17.22■□□□□ 0.35
CPNE3O75131 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CPNE3O75131 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPNE3O75131 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.21■□□□□ 0.35
CPNE3O75131 KRT8P10-201ENST00000450021 1447 ntBASIC17.21■□□□□ 0.35
CPNE3O75131 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CPNE3O75131 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CPNE3O75131 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CPNE3O75131 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.21■□□□□ 0.35
CPNE3O75131 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.21■□□□□ 0.35
CPNE3O75131 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
CPNE3O75131 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CPNE3O75131 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CPNE3O75131 NUS1P2-201ENST00000417358 873 ntBASIC17.21■□□□□ 0.35
CPNE3O75131 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.21■□□□□ 0.35
CPNE3O75131 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.21■□□□□ 0.35
CPNE3O75131 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CPNE3O75131 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.21■□□□□ 0.35
CPNE3O75131 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CPNE3O75131 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 AC099343.3-201ENST00000605834 2503 ntBASIC17.21■□□□□ 0.35
CPNE3O75131 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.21■□□□□ 0.35
CPNE3O75131 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPNE3O75131 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms