Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK2O00526 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK2O00526 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK2O00526 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK2O00526 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK2O00526 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK2O00526 LINC01568-207ENST00000641790 1380 ntBASIC14.42□□□□□ -0.1
UPK2O00526 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK2O00526 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK2O00526 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK2O00526 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK2O00526 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
UPK2O00526 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK2O00526 AL355312.1-201ENST00000407115 2176 ntBASIC14.41□□□□□ -0.1
UPK2O00526 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK2O00526 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.41□□□□□ -0.1
UPK2O00526 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.41□□□□□ -0.1
UPK2O00526 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UPK2O00526 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 AC139713.2-201ENST00000641328 2723 ntBASIC14.41□□□□□ -0.1
UPK2O00526 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.41□□□□□ -0.1
UPK2O00526 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK2O00526 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.41□□□□□ -0.1
UPK2O00526 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.41□□□□□ -0.1
UPK2O00526 AC116407.2-201ENST00000613639 860 ntBASIC14.41□□□□□ -0.1
UPK2O00526 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK2O00526 LINC00602-201ENST00000629776 2065 ntBASIC14.41□□□□□ -0.1
UPK2O00526 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UPK2O00526 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
UPK2O00526 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UPK2O00526 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK2O00526 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 AC133963.1-201ENST00000504166 1679 ntBASIC14.4□□□□□ -0.1
UPK2O00526 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
UPK2O00526 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
UPK2O00526 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
UPK2O00526 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 AC113404.2-201ENST00000507884 177 ntBASIC14.4□□□□□ -0.1
UPK2O00526 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK2O00526 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK2O00526 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK2O00526 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
UPK2O00526 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.4□□□□□ -0.1
UPK2O00526 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK2O00526 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK2O00526 KRT18P22-201ENST00000402024 1347 ntBASIC14.4□□□□□ -0.1
UPK2O00526 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
UPK2O00526 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK2O00526 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK2O00526 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK2O00526 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK2O00526 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK2O00526 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms