Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX39AO00148 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.17■□□□□ 0.82
DDX39AO00148 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.17■□□□□ 0.82
DDX39AO00148 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX39AO00148 LINC01711-201ENST00000598340 967 ntBASIC20.17■□□□□ 0.82
DDX39AO00148 AL138831.2-201ENST00000606564 490 ntBASIC20.17■□□□□ 0.82
DDX39AO00148 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DDX39AO00148 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DDX39AO00148 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX39AO00148 KRT8P47-201ENST00000604727 1398 ntBASIC20.17■□□□□ 0.82
DDX39AO00148 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX39AO00148 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
DDX39AO00148 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX39AO00148 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX39AO00148 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX39AO00148 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.16■□□□□ 0.82
DDX39AO00148 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX39AO00148 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.16■□□□□ 0.82
DDX39AO00148 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX39AO00148 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX39AO00148 AC125634.1-201ENST00000438758 1403 ntBASIC20.16■□□□□ 0.82
DDX39AO00148 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX39AO00148 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX39AO00148 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX39AO00148 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DDX39AO00148 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DDX39AO00148 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX39AO00148 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX39AO00148 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX39AO00148 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX39AO00148 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
DDX39AO00148 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX39AO00148 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
DDX39AO00148 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX39AO00148 KRT16P4-201ENST00000453883 522 ntBASIC20.15■□□□□ 0.82
DDX39AO00148 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.15■□□□□ 0.82
DDX39AO00148 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.15■□□□□ 0.82
DDX39AO00148 MIR5100-201ENST00000579544 119 ntBASIC20.15■□□□□ 0.82
DDX39AO00148 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DDX39AO00148 AL591684.3-201ENST00000605187 298 ntBASIC20.15■□□□□ 0.82
DDX39AO00148 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DDX39AO00148 AC114341.1-201ENST00000618070 349 ntBASIC20.15■□□□□ 0.82
DDX39AO00148 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX39AO00148 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX39AO00148 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
DDX39AO00148 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX39AO00148 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX39AO00148 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.15■□□□□ 0.82
DDX39AO00148 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX39AO00148 AP000997.3-201ENST00000623333 2250 ntBASIC20.15■□□□□ 0.82
DDX39AO00148 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
DDX39AO00148 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DDX39AO00148 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
DDX39AO00148 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX39AO00148 AC100803.2-201ENST00000562459 1963 ntBASIC20.14■□□□□ 0.81
DDX39AO00148 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX39AO00148 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX39AO00148 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
DDX39AO00148 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
DDX39AO00148 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.14■□□□□ 0.81
DDX39AO00148 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.14■□□□□ 0.81
DDX39AO00148 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX39AO00148 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 AKR1C7P-201ENST00000305623 895 ntBASIC20.14■□□□□ 0.81
DDX39AO00148 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX39AO00148 POM121L3P-201ENST00000419331 1163 ntBASIC20.14■□□□□ 0.81
DDX39AO00148 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.14■□□□□ 0.81
DDX39AO00148 AC079781.3-201ENST00000449110 356 ntBASIC20.14■□□□□ 0.81
DDX39AO00148 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.14■□□□□ 0.81
DDX39AO00148 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.14■□□□□ 0.81
DDX39AO00148 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.14■□□□□ 0.81
DDX39AO00148 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.14■□□□□ 0.81
DDX39AO00148 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX39AO00148 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX39AO00148 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX39AO00148 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
DDX39AO00148 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.13■□□□□ 0.81
DDX39AO00148 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms