Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 IRX1P1-201ENST00000438849 1838 ntBASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 MAPK10-262ENST00000641051 5738 ntBASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
CHKB-CPT1BH3BT56 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC9.96□□□□□ -0.82
CHKB-CPT1BH3BT56 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 CICP4-201ENST00000447359 2812 ntBASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 SENP5-202ENST00000419026 973 ntTSL 3 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 AC245052.3-201ENST00000450182 901 ntBASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 AC131212.3-201ENST00000624087 4219 ntBASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 GTSE1-AS1-202ENST00000623117 1518 ntBASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CHKB-CPT1BH3BT56 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms