Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 UBE2SP1-201ENST00000450587 669 ntBASIC18■□□□□ 0.47
TRIM49D1C9J1S8 TSPY20P-201ENST00000450910 630 ntBASIC18■□□□□ 0.47
TRIM49D1C9J1S8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 AC098590.1-201ENST00000468126 897 ntBASIC18■□□□□ 0.47
TRIM49D1C9J1S8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18■□□□□ 0.47
TRIM49D1C9J1S8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 AL158047.1-201ENST00000445918 881 ntBASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 BX088651.1-201ENST00000540551 451 ntBASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 AP003071.4-201ENST00000562276 1284 ntBASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM49D1C9J1S8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 CCR12P-201ENST00000446203 998 ntBASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 RBM17P1-201ENST00000453646 1190 ntBASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM49D1C9J1S8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms