Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 LINC01023-201ENST00000606054 436 ntBASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 AL023973.1-201ENST00000624619 620 ntBASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 AC138028.4-201ENST00000564984 1845 ntBASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 NOC2LP1-202ENST00000452600 2235 ntBASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.92□□□□□ -0.34
TRGV4A0A0C4DH28 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 AC113347.1-201ENST00000413321 391 ntBASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
TRGV4A0A0C4DH28 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 FLJ13224-201ENST00000313737 1514 ntBASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 BX664615.1-201ENST00000443558 458 ntBASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 AC010203.1-204ENST00000548782 407 ntBASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 GCSHP2-201ENST00000560971 527 ntBASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 AL138966.2-201ENST00000621997 464 ntBASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 AL157888.1-201ENST00000631930 593 ntBASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV4A0A0C4DH28 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms