Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COL4A3BPQ9Y5P4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A3BPQ9Y5P4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COL4A3BPQ9Y5P4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 RN7SL606P-201ENST00000472779 293 ntBASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 AC124864.1-201ENST00000623408 392 ntBASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL4A3BPQ9Y5P4 AC138932.1-201ENST00000534164 6830 ntBASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 FLJ13224-201ENST00000313737 1514 ntBASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 AP000867.3-201ENST00000524675 377 ntBASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 PRELID1P1-202ENST00000567272 903 ntBASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.08■□□□□ 0.81
COL4A3BPQ9Y5P4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL4A3BPQ9Y5P4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 AL450487.1-201ENST00000426799 995 ntBASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 LINC00167-201ENST00000530583 1419 ntBASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 AC005332.8-201ENST00000622750 2735 ntBASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A3BPQ9Y5P4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 LINC00602-201ENST00000629776 2065 ntBASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A3BPQ9Y5P4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms