Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHA3Q9Y5H8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 LINC00304-203ENST00000565008 1864 ntBASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHA3Q9Y5H8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHA3Q9Y5H8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PCDHA3Q9Y5H8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDHA3Q9Y5H8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHA3Q9Y5H8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 HCG11-201ENST00000411553 5696 ntBASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA3Q9Y5H8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 BCL2-203ENST00000589955 5011 ntBASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHA3Q9Y5H8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHA3Q9Y5H8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHA3Q9Y5H8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHA3Q9Y5H8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA3Q9Y5H8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA3Q9Y5H8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA3Q9Y5H8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHA3Q9Y5H8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms