Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRCH1Q9Y2L9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 AC133963.1-201ENST00000504166 1679 ntBASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 AC098934.4-201ENST00000564127 592 ntBASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 CYP2T3P-201ENST00000601990 817 ntBASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRCH1Q9Y2L9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 AC097658.1-201ENST00000475555 843 ntBASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 AL589743.5-201ENST00000616611 1050 ntBASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 PHGDH-209ENST00000641074 1780 ntBASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LRCH1Q9Y2L9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRCH1Q9Y2L9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 MYLKP1-201ENST00000509077 1580 ntBASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms