Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 TSPY19P-201ENST00000418461 509 ntBASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 TSPY18P-201ENST00000441642 509 ntBASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 LINC00265-3P-201ENST00000447588 903 ntBASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 AP000867.3-201ENST00000524675 377 ntBASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 AL031008.1-201ENST00000619963 541 ntBASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 AC073592.3-201ENST00000625118 1834 ntBASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC3AQ9Y2H6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 DRAXINP1-201ENST00000437611 948 ntBASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 AC009102.3-201ENST00000623118 1491 ntBASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
FNDC3AQ9Y2H6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC3AQ9Y2H6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
FNDC3AQ9Y2H6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms