Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 AK4P3-201ENST00000418260 669 ntBASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 AC092647.4-201ENST00000457211 535 ntBASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 AC079602.3-201ENST00000623931 403 ntBASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VPS9D1Q9Y2B5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS9D1Q9Y2B5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS9D1Q9Y2B5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.89■□□□□ 0.46
VPS9D1Q9Y2B5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS9D1Q9Y2B5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
VPS9D1Q9Y2B5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VPS9D1Q9Y2B5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
VPS9D1Q9Y2B5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
VPS9D1Q9Y2B5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 KRT18P57-201ENST00000443599 1254 ntBASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 LINC01238-205ENST00000567549 1107 ntBASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS9D1Q9Y2B5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 ZNF444P1-201ENST00000559497 298 ntBASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
VPS9D1Q9Y2B5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms