Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.02□□□□□ -0.01
CDC42EP3Q9UKI2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDC42EP3Q9UKI2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 RPL13AP23-201ENST00000480739 586 ntBASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 AC008608.2-201ENST00000606089 416 ntBASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 OR6D1P-202ENST00000641007 5290 ntBASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDC42EP3Q9UKI2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 FZD10-202ENST00000539839 3282 ntBASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 MIR940-201ENST00000401276 94 ntBASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 MIR5100-201ENST00000579544 119 ntBASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 AP005901.3-202ENST00000581653 237 ntBASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 AL390961.4-201ENST00000623958 2535 ntBASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDC42EP3Q9UKI2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 AC135050.7-201ENST00000624508 2218 ntBASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.99□□□□□ -0.01
CDC42EP3Q9UKI2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms